Vicia villosa (hairy vetch): 131626857
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Entry
131626857 CDS
T09680
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03015
mRNA surveillance pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131626857
09122 Translation
03013 Nucleocytoplasmic transport
131626857
03015 mRNA surveillance pathway
131626857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131626857
03041 Spliceosome [BR:
vvo03041
]
131626857
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131626857
TREX complex
131626857
Spliceosome [BR:
vvo03041
]
Complex C
Other components
EJC/TREX
131626857
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131626857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
131626857
NCBI-ProteinID:
XP_058753679
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MPAGMDMSLDDIINTTTARRRFTGTHGPNRNVGVRNTIRITPYSIPPSQIARESLRRRSS
VDVPETIIDRDAVQTRPITKLYLSNLDDRVSNEDIHLLFSEEGALERYSIHYDQFGRSKG
TGEVVFTKQSDALSALKRYNNMKLDGKTLQIELVGIGTSSITPANTPLSQSSILGRPDDR
VFAKSSILGRPNDRVFAREERKIGGSRYLNSFTHGGYLPMGHGEEKWIRKVSFRAIGRDF
GRYDRRPVEAKRNFQKLSVKDLDEDLDKYHLEAMRISKENGKGNRD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccggcatggacatgtcactcgacgatatcatcaacaccaccaccgctcgccgc
cgattcaccggaactcacggaccaaaccgcaacgtcggtgttcgtaacacgatcagaatc
acgccgtactctattcctccgtctcagattgctagagaatcgttgcgaagaagaagtagc
gtcgatgttccggaaacgattatcgatcgtgacgctgttcaaactcgacctatcactaaa
ctctatttgtctaacttggatgatagggtttccaacgaagatattcatctgttgttctcg
gaggaaggtgcgttggaaaggtattccattcattatgatcagtttgggagatcaaaagga
acaggagaagttgtctttacaaagcagtctgatgctttatcagccctcaaaaggtacaac
aatatgaagcttgatggaaagacattgcaaattgagcttgtcggaattggaacaagttct
attactcctgccaatacccctctcagtcaaagcagcatactgggaagaccagatgatcgc
gtctttgcaaaaagcagcatactgggaagaccaaatgatcgtgtctttgcaagggaagaa
aggaagattggaggtagcaggtaccttaacagctttacacatggtggatatcttccaatg
ggccatggagaagagaagtggataaggaaagtgtcttttagagctatcggtcgtgacttt
gggaggtatgaccgccgccccgtagaagcaaaacgcaatttccaaaagttgtctgtgaaa
gatcttgatgaagatctggataagtatcacctagaggctatgcggattagcaaagaaaat
ggaaagggaaatcgggattga
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