Vicia villosa (hairy vetch): 131627518
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Entry
131627518 CDS
T09680
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131627518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131627518
Spliceosome [BR:
vvo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131627518
Complex C
U4/U6.U5 tri-SnRNP related factors
131627518
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
131627518
NCBI-ProteinID:
XP_058754346
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGSDTDVYHYL
EPLYNDYRKLRRKLADGQFSLTHVDEVIDELLTTDYSCDIAMPRIKKRWTLESLGSLEPR
QSALEEDFDEEEENEDNEQPADELEEKTHEKDYYRGRSPARERDRDRRRESHRHRDRDYE
REYDRDYDRERGRGRDRDRDREKERDRDRERDRDRYRVREEKDYGREREGRERERRDRDR
DRGRRRSYSRSRSRSRDRKEHDGGDYRKRHARSSVSPRRHGDGAEDGEPKRKKEKKEKKE
KKDDGTDHPDPEIAEANRIRASLGLKPLRM
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggatccagcagcgaagagcataagaggaacaaaccctcaaaaccta
gtggagaagattctccgctcaaagatctaccagaacacatattggaaggaacaatgcttc
ggtttaacggcggagaccttagtcgacaaggccatggagctcgaccacctcggcggcacc
tacggtggcaaccgcaaacccactcccttcatgtgcctcgtcatgaaaatgctccagatt
cagcccgagaaagaaatcgtcatcgagttcataaaaaacgatgattacaagtatgtgagg
atacttggtgcgttctatttgcgtcttacgggatctgatactgatgtgtaccattacctg
gaaccgttgtataatgattatagaaaactgaggcggaaattagctgacggacagtttagt
ttgacgcatgttgatgaggtcattgatgaacttctcacaacggattattcctgtgatatt
gctatgccgcgtattaagaaaaggtggactcttgaatctcttggttcattagaacctaga
caaagtgcacttgaagaggattttgatgaggaagaggagaatgaggataatgaacaacct
gccgatgagcttgaagagaagacccatgagaaggattattatcgtgggagaagccctgca
agggaaagagatagggatagaagacgtgaaagtcatagacacagggatcgcgactatgaa
agagaatatgatagagattatgacagagagcgtggacgtggccgagatagagacagagat
agggaaaaggaaagggacagagatagggagagagacagagaccgatatcgtgtgagggaa
gaaaaggattatggccgtgagagagaaggcagggagcgagagagaagagacagagatcgc
gaccgtggtaggagaaggagctactcaaggagtcgaagtagaagcagggatcgcaaggaa
catgatggtggggactacaggaagagacatgctcgtagtagcgttagtcctagaaggcat
ggagatggagctgaagatggggagccaaagaggaagaaggagaagaaagaaaagaaggaa
aagaaggatgacggaactgaccatccagatccagagattgccgaagcaaacaggatacga
gcttcactgggtttgaaaccactgaggatgtga
DBGET
integrated database retrieval system