Vicia villosa (hairy vetch): 131628026
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Entry
131628026 CDS
T09680
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131628026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131628026
03009 Ribosome biogenesis [BR:
vvo03009
]
131628026
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131628026
Spliceosome [BR:
vvo03041
]
Complex A
U1 snRNP components
U1 related factors
131628026
Complex B
131628026
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
Helicases
131628026
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131628026
NCBI-ProteinID:
XP_058754875
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNPYDNRYSDSTSFRGRRSDLVGPMPPPNFGRGGPAPYGAPYASHAPTGFGSAPVTPIPH
FLPPSGGFSVGRGGGFGPRLGNGHASDRKYDSGRYGSSGGGGRGRGGFGGGGGRGGSQGF
RGSGGGRGGRGGGFGGRHGSSKDDLNNITLPKQDFRNLVPFQKNFYVESPVITAMSDQQV
MHYRASRDITVEGHDVPKPIRSFHEANFPDHCLEVIAKLGFVEPTPIQAQGWPMALTGRD
LIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSR
SNLRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEARHTNLQRVTYLVLDEADRM
LDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVVIGSPYLKANQSI
NQVVEVVTDMEKYNRLIKLLKDVMDGSRILIFTETKKGCDQVTKQLRMDGWPALSIHGDK
NQSERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRA
GAKGTAYSFFTRANAKYARDLIKILQDAGQIVSPALSELTRSAGFGQHASKGGFRSRGRG
GGYGNRGSTSGSNAIPVGGKRPWQYV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctacgacaatcgttactccgattccacttccttccgcggccgccgcagtgat
ctcgttggacctatgccgccacctaatttcggccgcggcggtcccgctccttacggtgct
ccttatgcatcccatgctcccaccggtttcggatccgcacctgtaaccccgattcctcac
tttttacctccttccggtggatttagtgtaggtcgtggcggtggttttggccctagattg
ggcaacggtcacgcatctgatagaaaatatgactctggtcgttatggtagtagtggtggt
ggtggaagaggtcgtggtggttttggtggtggtggtggtagaggtggaagtcaaggtttt
agaggctctggtggtggtagaggagggagaggtggcgggtttggaggtagacatggatct
tctaaggatgacttgaataatattactcttccgaagcaagattttaggaatttggttcct
tttcagaagaatttctatgttgaaagccctgtgataacagccatgtctgatcagcaagtt
atgcattatcgtgcgagtagggatattactgttgaagggcatgatgtgccaaaaccaatt
cggtcttttcacgaggctaattttcctgatcattgccttgaagttattgccaagttgggt
tttgttgaacctactccaattcaggctcagggttggcccatggctcttaccggtagagat
ttaattggcattgctgagactggctccggtaaaactctgtcgtatttacttccggctata
gttcatgtcagtgcacaacctcgactagtacaaggggagggtcctgttgtcctggtttta
gcaccaactagagagttagctgttcaaattcaacaagaagctatgaaatttgggtcacgg
tcaaatcttagatgtacatgcatatatgggggtgctccaaagggccctcaaattcgtgat
cttagaatgggtgttgagattgttattgctacacctggtcgtctaatagatatgctagaa
gctcggcacacaaacctccagagagtgacatatcttgtcttggatgaagctgataggatg
ttggatatgggttttgaacctcagattcggaagattgtaaaccagattcgaccagatagg
cagacattatactggagtgcaacgtggccaaaggaggttgaagctctggcaagacagttt
ctgcacaacccatataaggtagttattgggtcaccatatctaaaagcaaaccaatctata
aatcaagttgttgaagttgtcactgacatggagaaatataacagattgatcaagctgctg
aaagatgtgatggacgggagccgaattctaatatttacggaaacaaaaaagggatgtgac
caagttacaaaacagttgagaatggatggatggccagcattatctatccatggtgataaa
aaccagtctgaaagggactgggttttggctgaatttaagagtggcagaagtccaataatg
actgccaccgatgttgctgcacggggtcttgatgtgaaggacataaaatgtgtcgtcaat
tatgactttccatcaagcctcgaagattatgtccacagaattggtcgaactggtcgtgca
ggagctaaaggaactgcatacagtttttttacccgtgccaatgccaagtatgcgagggat
ttgataaagatcttacaagatgctggtcagattgttagtcctgcattgtctgaattgacc
cggtcagctggttttggtcaacatgcatcaaaaggaggttttcgctcaagaggacgggga
ggcggctatggcaatcggggttcaacatctggatccaatgccattcctgtaggcgggaag
aggccgtggcagtatgtgtaa
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integrated database retrieval system
