Vicia villosa (hairy vetch): 131633251
Help
Entry
131633251 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131633251 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131633251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131633251
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131633251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_12
TPR_1
ARM_TT21
TPR_19
ARM_TT21_N
DUF627
TPR_8
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
131633251
NCBI-ProteinID:
XP_058759943
LinkDB
All DBs
Position
LG1:complement(32114627..32121286)
Genome browser
AA seq
849 aa
AA seq
DB search
MESRESTTPSVPSTNNRDAPSAAAEVDDGLFSLAKDAAVHYQSGKFVECVEVMNQLLQKK
PNDPKVLHNIAIAEFFRDGCSDPKKLLEVIYGIKFIQRKYDELTLTSGDQGEPVNNVANK
VAFGSKGSNNTDTIHPDEFESTAAALNIAIIWFHLHDYAKTVSVLEPLFQRIDPITDQST
ALHICLLLLDASLACHDASKSADVLTYLEKLFSGGTASQGDYGNTAQQQSANLISKSAPV
TISESAADPSSSDLGSSANTSENHLSRTLSEDGLDYEAMILDMGGQNLTRPTGPSSNVLS
RALVDRFSSLDLKLKLQLYKVQFLILTRNLKIAKREVKLAMNIARGRDSSRALLLKSQLE
YARGNHRKAIKLLMASSSNRTDTEFSSIFNNNLGCIYYQLGKYQTSSIFFSKALTNCSSL
RKEQPIKLSTFSQDISLLIIYNCGMQHLACGKPILAARCFQKASLVFYKQPLLWLRLSEC
CLMALEKGLIKSCRVPSEKLEVGACVVGLEKWRQLVVKDQIPGNGHLESSRGNEHSPSED
GCLKLSMSLARQCLLNALHLLDSYSTNRLKSGLPSNSSVENDTSEVLPSKNSSRKNSHVI
DSKAFSGSIGLGQVNSNGDTKEQKGGASQELFQNSLSYYEDVCRRDNQLVKQAVLANLAY
VELELDNPVKALAAAKSLFELPECSRIYLFLGHVYAAEALCLLNRPKEAAEYLSYYLSGG
NNVELPFSQEDCEKLQVERTVEFEEVNVGSTAAKGSLQDTQSIVFLKPEEARAAIYANFA
VMSAMQGEFEKASMLVTQALSILPNSPEATLTAVYVDLLLGKQQEALAKLKSCSRIRFLP
SGVTLNKSS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcgtgaatcaacaacaccttctgttccgtcaaccaacaaccgtgatgctcct
tctgccgccgcggaagttgacgacggccttttctctctcgccaaagacgctgctgtgcat
tatcaatctggcaagttcgttgaatgcgtcgaggttatgaatcagctcttgcaaaagaaa
cctaacgatccaaaggtccttcataatatagcaattgcagaattcttccgagatggttgt
tcagatcccaaaaagttgcttgaagtaatctacggcatcaagttcattcagagaaaatac
gacgagcttaccctgacttctggggatcaaggagagccagttaacaacgtcgcaaataaa
gttgcttttggatccaaaggaagcaataatactgacacaatacatccagatgaatttgaa
tctactgccgcagctctaaatattgccatcatctggtttcatcttcatgactatgcaaag
acggtatcagttttggagcccctatttcaaaggattgaccccataactgaccagtcaaca
gctctacatatttgtcttctgctgcttgatgctagccttgcttgccatgatgcatcaaaa
tcagctgatgtgttgacttatctggagaagctatttagtggtggtactgcgagtcaaggc
gactatggaaatacagctcagcaacaatctgcaaatctaatctctaagtctgcacctgtc
accattagtgaatctgctgctgatccatccagttctgatttaggctcaagtgctaataca
tctgaaaatcatctatccagaactttgtctgaagatgggcttgattatgaagccatgatt
ttggatatgggtggacaaaatttaactaggccaacgggcccgtcttcaaatgttctttct
agagctttggttgacaggttttcttctcttgatttaaagctcaagttgcaactttacaaa
gtacagtttctaattcttactaggaacctgaagatagcaaaaagagaagtcaagctggct
atgaacattgcacgtggacgagattcatccagggctttgcttttgaaatctcagcttgaa
tatgctcgtggtaaccaccgcaaggccataaagctattgatggcatcaagtagtaatagg
acggacacagaattttcaagcatatttaacaacaatcttgggtgcatttattatcagctt
gggaaatatcagacgtcctcaattttcttctcaaaagcattaactaattgttcgtccttg
agaaaggagcaaccaataaagctgagcactttctcgcaggatatttctctccttataatt
tataattgtggtatgcagcacttggcttgtggaaagccaatacttgcagctcgatgtttt
cagaaggcaagcttagtcttctacaaacagcctctcttgtggctccgactctcagaatgc
tgtctgatggctttagaaaagggcctgatcaaatcatgtcgggttccttcagagaagttg
gaggttggagcttgcgttgttgggttggaaaaatggaggcaacttgttgtgaaagatcaa
attccaggtaatggacacttggaatcatccagagggaatgaacatagtccaagtgaagat
ggttgtctgaagttatcgatgtcccttgctcgacagtgtctcttgaatgctcttcacttg
ctagactcgtacagtacaaatcgtttgaaatctggcttgccctctaattcttctgtggag
aatgatacaagtgaagtgttaccttcaaagaattcaagtcgtaaaaattcgcatgttatt
gattcaaaggcattttcaggatcaataggtttaggtcaggtaaattctaatggggacaca
aaagaacagaagggaggagctagtcaggaactctttcagaactccctatcgtattatgaa
gatgtctgtagaagagataatcaattggttaagcaagctgttcttgctaatttagcttat
gtggagctagaattggacaatcctgtgaaggcactagcagctgcaaaatctctctttgaa
cttccagaatgttccagaatttacctttttttaggccatgtttatgcggcagaggctctt
tgcttactgaacagaccaaaggaagctgctgagtacttatcatattatttgtctggagga
aacaatgttgaattgccattcagccaagaggactgtgagaaattgcaagtagagaggact
gttgaatttgaagaggtaaatgttggatccactgctgccaagggttctcttcaggatacg
caaagtattgttttcctcaagccagaggaggcacgtgcagcaatttatgcaaactttgct
gtaatgtctgcaatgcaaggtgaatttgagaaagccagtatgttggttacccaggcattg
tccatattgcccaacagtccagaagctaccctcactgcagtttatgtggatctcttgctt
ggtaagcaacaggaagctctagccaagctaaaaagttgtagccgtattaggttcctgccc
agtggagtaacattaaataaatcttcatga
DBGET
integrated database retrieval system
