Vicia villosa (hairy vetch): 131633748
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Entry
131633748 CDS
T09680
Name
(RefSeq) endoribonuclease Dicer homolog 3a-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vvo03036
]
131633748
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131633748
microRNA pathway
RISC loading complex
131633748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
ResIII
DEAD
Helicase_C
PAZ
SNF2-rel_dom
dsrm
DND1_DSRM
AAA_22
Motif
Other DBs
NCBI-GeneID:
131633748
NCBI-ProteinID:
XP_058760418
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MDSSNNDHNQNQTKNLKRSFDQLYAKPHVEVSPSQESLVTNLVPRRDQLEAFEIAKRRNT
IAIMDTGSGKTLIAIMLIKEVGQAVRSSGVKKIIVFLAPTVVLVNQQYKNIKHNTDLQVE
EYHGAKGVDTWNFESWQKEVKDNDVMVMTPQTLLDALRKAFLSIETICLIVIDECHQASG
NHPYAKIMVEFYHQANVKPKIFGMTASPIGKRGVSSTLDCKYQISDLENLLDSRKYTVKD
RTEMDTCIPSAKESCRYYDQARSPALSLKPKIEASWSKCDVLLSDFKSSYKDMDDKFKTL
HQRMSNELAKILYCLEDLGLLCACEAAKICHQKFSKIYGECEVYRKANLQCVTVIEEVIQ
IIEESLHLADEMILDVEFDFSKAVDMGYISPKLFELIKLFQSFGEPSQLLCLIFVERIIA
AKVIEIFVKKVSQISHLTVAYVTGSNTSADALARNRQKEIMDSFRSGKINLLFTTDVLEE
GIHVPNCSCVIRFDLPTTVCSYIQSRGRSRRANSQFILMIERGNLKQRNQLFDIIKGERS
MTDAAASKDNESNLRAFTVRKTEAYYVDSTGASVNLDSSVSLVNQYCEKLPRDKYSSPKP
KFDLLPVEGGYQCKLILPPNAAFQTIVGSSGKDMRLAKSLVCLEACKKLHQMGALNDHLV
PFVEDPAEADLKSKELSSGAVAGAGTTKRKELHGTTGIRALCGSWGDKLDGAKFYGYKFE
FQCNIVHEIYSGFVLLVESKLDDDVGSMDLDLYLISKMVKTSVIPCGEVDLDAEQVAKAR
SFHEIFFNGLFGRLIRKSETAKGEREFLLQKDTDLLWNPKNSYLLLPLEKSNDICTGSLQ
IHWSAISSCSSAIEFVRRKFSLVAEDSDDTSSSAMEPESTNIFHFANAVADVSNIKDTVA
LAVHTGKIYCIIDVVDNSSAESPFDGNNDKSGSKITFSQYFKERYQITLKHPEQPLLRLR
QGHNAHNLFLNTPEEDAGEKSSQVGPINPKAPMHVHMPPELLCLLDVKRDVLKSMYLLPS
LMYRIESLMLSSQLRAEINGHPDNFKIPSSLILEALTTLRSCEKFSMERLELLGDSVLKY
AVSCHLFLKYPKKHEGHLSAKRQWAVRNSTLHKLGIDRKLQGYIRDSAFEPRRWIAPGQD
SIHTAPCDCGLETLEVPFDAKFITEDPQVVVGKLCDRGHRWMCSKTIADCVEALIGAYHV
GGGLVASLHVMKWLGIDSELELSMVEEAIVAASLHTYKPKVNEIASLETKIGYEFSVKGL
LVEATTHLSETEHGTGCCYERLEFLGDSVLDLLITWHLYQSHTEIDPGELTDLRSASVNN
DSFAQAAVKHNLHPHLMHSSGLLQGQISEYVKAISESEDNTVSLPGVKAPKALGDLVESI
AGAILIDTKLDLDQVWKVFNPLLSPIVTPDKLELPPLRELNQLCDSLGYFVKVKVKCDKK
GFMDHVVLSVQLPNALLVRDGRGPNKKSAKGDAAYHLLKDLEKRGISYSSSKGKRVIDFS
TPACQAEEQPPQPVAHKKPKLDKSNLTAKEPTSDVKQTSSDSSDCNGSVPVILSINMKKG
GPRSLLYDLCKRKQWPLPSFDSTEYKDRTQFQSVEGLEGSKGTNCFVSKITLCIPDHGNI
ECNGEARADKKSSFDSAAVNVLYELQRLGKVKIADVSQ
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcaaacaatgatcataatcagaatcaaactaagaatctcaagcgaagtttc
gatcaattgtatgcaaaaccccatgttgaagtttcaccctctcaagaatctctcgttaca
aatttggttcctagaagggatcagttagaggcgtttgagattgcaaagaggaggaacaca
atagcaatcatggatacaggttcaggaaaaacattgattgctataatgcttattaaggaa
gttggtcaagctgttaggtctagtggtgtcaaaaagattattgttttcttagctccaaca
gttgttttggtcaatcagcaatacaagaatataaaacataatactgatcttcaagttgag
gaataccatggggctaaaggagttgatacatggaatttcgagagctggcagaaggaagtt
aaggacaatgatgtaatggttatgacaccccagactcttttggatgccttaagaaaagca
ttcttgagtatagaaacaatatgcttgatagttatcgatgagtgtcatcaagcatcaggc
aaccatccctatgcaaagataatggtggaattttatcaccaagctaatgtgaagccaaag
atttttgggatgacagcatcaccaattggtaaaagaggtgtttcttctactttggattgt
aagtatcagatatcagaccttgaaaacctcttggattctcggaaatatacggtaaaagat
cggacagagatggatacatgtatcccatctgcaaaagagagttgtagatactatgaccaa
gctcggtcccctgctttgagtttgaagccgaaaattgaagcgtcgtggtcgaagtgtgat
gtgttgttatcagattttaaaagtagctataaggatatggacgataaatttaagacactg
catcagaggatgtccaatgagcttgcgaagattttatattgcctcgaagatcttggactg
ctgtgtgcttgtgaggctgctaaaatatgtcatcagaaattctccaaaatttacggagag
tgtgaagtttacagaaaagccaatcttcagtgtgtaactgtcattgaagaagtaatccaa
ataattgaagaatccctccatcttgctgatgaaatgattttggatgttgaatttgatttt
tcaaaggcagtggacatgggatacatatcacccaaattatttgaactcattaaactcttc
caatcatttggagagcctagtcagttattgtgcctcatttttgtggaaagaatcattgcg
gctaaggtgattgaaatatttgtgaaaaaagtttcccagatatctcatctcacggttgcc
tatgtaactggaagcaatacatcagctgatgcactggctcgtaacaggcagaaagagata
atggattctttccgatccggaaagatcaatcttctatttactactgatgtacttgaggaa
ggaatccatgtgccaaactgctcgtgtgtgatacgttttgacctccccacgacagtttgt
agttatatccaatctcgtggaagatctaggcgtgctaactcccaattcatcttgatgatc
gagaggggaaacttgaagcaaagaaatcagctttttgacataatcaagggggagcgttcc
atgactgatgcagctgctagcaaagacaatgaatctaatttaagggcgtttacagtaagg
aaaacagaagcatactatgtggattctactggagcatcagtaaatttagattctagtgtt
agtcttgtaaatcaatattgcgaaaagctcccacgagataagtattcctctccgaagccc
aaatttgacttactacctgtggagggagggtaccagtgtaagctaattttaccacctaat
gccgctttccaaacaatagttggatcctcaggaaaagacatgcgtttggcaaagagtctt
gtatgtttagaagcttgtaagaagcttcatcaaatgggcgccttaaatgatcatcttgtt
cctttcgttgaagatcctgcagaagcagacttgaaaagcaaggaattaagttcaggtgca
gttgcaggcgcaggaaccacgaaaagaaaagagctacacggaacgaccggcattcgggca
ttatgtggttcatggggggacaaacttgatggagccaaattttatggatataaatttgaa
ttccaatgtaatattgtccatgaaatttactctggatttgttcttctggttgagtcaaag
cttgacgatgacgtgggaagtatggacttagatctgtatttaatctcaaagatggtgaag
acttctgtcattccatgcggggaggttgacttggatgctgaacaggtggcgaaagcaaga
agcttccatgagatttttttcaatggtttgtttgggagattgattcgtaaatccgaaaca
gcgaaaggagaaagggagtttttactgcagaaagacacagatttattgtggaatccaaaa
aactcgtatttgctcctaccacttgagaagtcaaatgatatatgtacgggatctttgcaa
atacactggtctgcaatcagttcttgttcttctgctattgagtttgtaaggcgtaaattt
tcgttggttgctgaagattctgatgataccagttcatcggctatggaacccgaaagcact
aacatttttcactttgccaatgctgtcgctgatgttagtaacattaaagacacagtagct
ttggcggttcatactggaaaaatttattgtatcattgatgttgttgataactcatctgct
gaaagtccttttgatggaaacaatgacaagtcgggaagcaaaataacgttctctcaatat
ttcaaggaaaggtatcaaatcactctaaaacatccagaacagcctttgttaaggctgagg
caaggccataatgcgcataatctttttttgaacactcccgaggaagatgcaggggaaaag
tcatcacaagttggcccgataaatccaaaggcgccaatgcatgttcacatgccacctgag
cttctttgccttcttgatgttaaaagagacgtgttgaagtcaatgtacttgctaccgtct
cttatgtaccgtattgaatctttaatgttatctagtcagcttagagcagagataaatggt
caccccgacaatttcaagatacctagctctctgattcttgaagcacttacaactttaaga
tcctgtgaaaagttttctatggaacgtcttgagttgctaggagattctgttttgaaatat
gctgtcagctgtcatctctttcttaaatatcctaagaaacatgaaggacatctatccgca
aaaagacaatgggctgttcgtaattcaaccctacataagcttggaatagatcgcaaatta
cagggatatattcgagactccgcatttgaaccacgtcgttggattgctcctggacaagac
tctatacacactgctccttgtgattgtgggttggaaaccctggaggtgcctttcgatgca
aagttcattacggaagatccacaagttgtggttgggaaattgtgtgacaggggtcaccgc
tggatgtgttcaaagactattgctgactgtgttgaagctcttataggagcataccacgtt
ggtggtggattggttgcttcacttcacgtgatgaaatggctaggaattgattcggaactt
gaactatccatggttgaagaagccattgttgctgcatctctacatacatataagccaaaa
gtaaatgagattgcaagcctggagacaaaaattggatacgaattttctgtcaagggactc
ttagtggaggcaaccacacatttatcagagacagaacatggaactggctgctgctacgag
aggcttgaatttcttggtgactcagtgttggaccttctcatcacatggcatctatatcag
agtcacactgaaattgacccaggagagttgactgatctgcgttctgcttctgtcaataat
gatagttttgcacaagctgctgttaaacataaccttcacccgcaccttatgcatagctca
ggattattacaaggccaaatatcagaatatgtaaaggccatttctgaatcagaagacaac
actgtatcactcccaggggttaaagctcccaaggcacttggagatctagttgagagtatc
gcaggggctatactaattgataccaaactcgaccttgatcaagtgtggaaggttttcaat
cctctgttatctcccattgttactcccgacaaacttgaactgcctccattgcgtgaatta
aatcaattatgtgactctcttggctattttgtaaaagtaaaagtaaagtgcgataagaag
ggattcatggaccatgttgtgcttagtgtacagctgccaaatgctcttctggttcgagac
ggaaggggaccgaataaaaaatctgcaaaaggagacgctgcttatcatttattgaaggac
cttgagaaaaggggaatttcgtatagctcctccaagggcaaaagagtaatagatttcagt
actcctgcttgtcaagctgaagaacaacccccacagccagtagcacataaaaaaccgaaa
ttggacaaatctaacttaacagcaaaggaacctacttctgatgtcaagcagacttccagt
gattcctctgattgtaatggttccgttccagttattttatcgattaatatgaagaaggga
ggaccacggagcctactatatgacttgtgcaagagaaagcagtggccattgccttcattt
gattcaacagaatacaaagacagaactcaatttcaatcggttgaaggcttggaaggaagc
aaaggaacaaactgttttgtgtcgaaaataaccttgtgcataccggatcatggtaatata
gaatgcaacggagaggctagagctgataagaagagctcatttgattctgctgcagttaat
gtgctctatgagcttcaacgcctcggaaaagttaaaatcgcggatgtttcccaataa
DBGET
integrated database retrieval system
