Vicia villosa (hairy vetch): 131634239
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Entry
131634239 CDS
T09680
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131634239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131634239
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131634239
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
131634239
NCBI-ProteinID:
XP_058760875
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Position
LG1:complement(37306957..37314824)
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AA seq
943 aa
AA seq
DB search
MDENFDGFDNKLPELKLDSKQAQGFLSFFKTLSDDPRAVRFFDRRDYYTAHGENATFIAK
TYYHTTTALRQLGSGSNALSSVSVSRNMFESIARDLLLERTDHTLEVYEGSGSNWRLVKS
GTPGNIGSFEDVLFANSEMQDSPVVVALSLNFRETGCTVGLGFVGLTNRLLGMAEFLDDS
HFTNVESALVALGCRECLVPIERGKSVEYKMLCDVLTKCGVMLTERKKSEFKTRDLVQDL
GRLVKGSIEAVQDLVSGFEFAPGALGSLLSYAELLADESNYGNYTLRRYNLDSYMRLDSA
AMRALNILESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINLRLDVVQA
FVEDTVLRQDLRQHLKRISDIERLVHNLQKRRAGLQHVVKLYQSSIRLPYIKSALDRYDG
EFSSMMKSRYLKDLELWTGVDRLNKFIELVETAVDLDHLENGEYMISSSYDTALTELKEK
QELLESEIHNLHRQTADDLDLQIDKTLKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVL
ETRKDGVKFTNTKLKKLGDKYQQILEEYKSCQKQLVIKVVEIAATFSEVFESLAELISEL
DVLLSFADLASSCPTPYTRPEITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREKS
WFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFAT
HFHELTALAHENGSNDTHKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPSAISLIDSSTEEVGSKRKREFESDDMSKGAAKARQ
ILEAFVALPLETMDKTQAMQEVRKLKDNLEKDAQNCLWLQKFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaattttgacggctttgataacaaacttcccgagctcaaattagattctaag
caagcgcaagggtttctgtcctttttcaaaaccctatctgatgacccgagggccgttaga
ttttttgatcgtcgggattactatactgcccacggtgagaatgcaacattcattgccaaa
acctattaccacactactactgctctgcgacagttgggtagtggatcaaatgctctttcc
agtgtgagtgtaagtaggaacatgtttgaatcaattgcccgtgatttactcttggagaga
acagaccatacacttgaggtctatgagggcagtggctctaattggagactggtcaaaagt
ggtacacctggtaatattggcagttttgaagatgttctgtttgctaacagtgaaatgcag
gattctccagttgttgttgcactgtcacttaacttccgtgaaactgggtgcaccgttgga
ttgggatttgttggtctaactaacagactactagggatggctgaattcctagatgacagt
cacttcacaaatgtggagtcagcattggttgctcttggctgcagagagtgccttgtgcca
attgaacgtggaaaatctgttgaatataaaatgttgtgtgatgtgttgactaagtgtggc
gtgatgctaactgagagaaagaaatctgaattcaagactagagatctggtacaggatctt
ggcaggcttgtcaaaggttctattgaagcagttcaagatttagtttctggatttgaattt
gcacccggtgctttggggtcactgctctcttatgcagagttacttgcagacgaaagcaat
tatggaaattatactctgcgtcggtacaatcttgacagttacatgaggttagattctgca
gccatgagggcactcaacatcttagaaagtaaaactgatgcaaacaaaaatttcagtttg
tttggtcttatgaatagaacctgtacagctggaatgggaaaaaggttattgcacatgtgg
ctaaagcagccattattagatgtaaaagaaattaacttgaggttggatgtagtacaagca
tttgtagaggacactgtgcttcggcaagatctgaggcagcatctaaaaagaatatcagac
attgagcgactggtgcacaatcttcagaagcgaagagctggtttgcaacacgttgttaaa
ctttatcagtcaagtataagattgccttacattaaaagtgccctggataggtatgatgga
gagttttcttcaatgatgaagagcaggtatttgaaagatttggagttatggactggtgtt
gatcgcttaaataaatttattgagcttgtagaaactgctgttgaccttgaccatctggaa
aacggggaatacatgatttcttcaagttatgacactgcactaactgaacttaaggagaag
caagaattactagagagtgaaatacataacttgcatagacaaactgctgatgatcttgat
ctgcaaatagacaagacattaaagttagataagggcacacaatttggacacgtttttaga
atcacaaagaaggaagagccaaaaataaggaagaagctcaacacccagtttattgtactt
gaaacccgtaaagatggagtgaagtttactaacacaaagctcaaaaaattgggagacaaa
tatcaacaaattcttgaggagtacaagagctgtcaaaaacagttggttattaaagtagtg
gaaattgcagcaactttctctgaggtgtttgaatctttagctgaattaatttctgaattg
gatgtgttgttaagctttgctgatctggcttctagttgtcctactccctatacaaggcct
gaaatcacctcatcggacgaaggagatattattttagaaggtagcagacatccttgtgtg
gaggcacaagactgggtgaattttataccaaatgattgtaagcttatcagagaaaaaagt
tggtttcaaataataacagggcctaatatgggtgggaaatcaacattcatccggcaggtg
ggcgtgaatattttgatggcgcaagttggttgctttgttccatgtgacaaagccagcata
tctgttcgtgattgcatttttgctcgtgttggtgcaggtgactgccaacttcgcggagtt
tctacctttatgcaagaaatgcttgaaactgcatcaatattaaaaggagctaccgaaaag
tccttgataatcattgacgagttgggacgcgggacatctacttacgatggatttggtctt
gcttgggccatttgtgagcacatagttgatgtgataaaagcccctactttatttgcaact
cactttcatgagctgactgcattagcccatgaaaatggtagcaatgatacacataaacag
attgttggtgtggcaaattatcatgttagtgcacatattgatgcatctactcgcaagcta
actatgctatacaaggttgaaccaggagcttgtgatcagagttttggtattcacgttgct
gagtttgcaaacttccctgaaagtgtggttgccctagctagagaaaaggctgcagaacta
gaagatttttctccgtctgcaatatccttaattgattcttctacagaagaggtgggttct
aaacgtaagagagaatttgaatctgatgacatgtctaaaggggctgcaaaggcccgccaa
attcttgaagcatttgttgctttgccacttgaaaccatggacaaaacgcaagctatgcaa
gaagttaggaagttgaaagataatttagagaaggatgcacaaaactgtctttggttgcaa
aagttcctgtag
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