Vicia villosa (hairy vetch): 131634396
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Entry
131634396 CDS
T09680
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131634396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131634396
03012 Translation factors [BR:
vvo03012
]
131634396
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131634396
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131634396
Translation factors [BR:
vvo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131634396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
Rad17
NACHT
BEX
Motif
Other DBs
NCBI-GeneID:
131634396
NCBI-ProteinID:
XP_058761044
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MLHCLFRPTFHSHHFFSIHPHAPKHFLSNTLISTSVMSYRPNYQGGGRRGGASSSGRGGG
RRGGGGGGGRGGGGRGEQRWWDPVWRAERLRQQQAEKEVLDEKEWWDKIEKMKKGGEQEM
VIKRYFSIADQQALADMAHQHELYFHAYNKGKTLVVSKVPLPDYRADLDERHGSTQKEIK
MSTDIERRVGNLLNMSQSTGTSAASLASVSTDMEHKISTTAIKSASQQTGTSTEKLSVAL
KERQELEQTRDIVQEMKSFREKLPAFKMKSEFLKAVQENQVLVVSGETGCGKTTQLPQFI
LEEEISRLRGADCNIICTQPRRVSAISVAARISAERGETLGKTVGYHIRLEAKRSAETRL
LFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSA
TINADLFSKYFANAPTMHIPGFTFPVAEHYLEDVLEKTRYSIKSEFDSFEGNARRKRKQQ
DSKKDPLIEMFEDLDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEATIEYICRNEGGGAI
LVFLTGWDEISKLLDKLEGNNLLGNRSKFLILPIHGSMPTIDQCEIFDRPPPNKRKIVLA
TNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASARQRRGRAGRVQPGV
CYRLYPKLIHDAMPEYQLPEILRTPLQELCLHIKSLQLGTVASFLGKALQPPDSLAVQNA
IELLKTIGALDDREELTPLGRHLCTVPLDPNIGKMLLMGSIFQCLSPALTIAAALAYRNP
FVLPINRKEEADAAKRYFSGDSCSDHIALLKAFEGWKEAKSRGAEKEFCWENFLSPVTLR
LIDDMRTQFLNLLSDIGFVDKSRGVHAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRT
AFYTKEVGKVDIHPSSVNAGIHLFPLPYLVYSEKVKTSNIYIRDSTNISDYALLLFGGNL
DPSKNGEGIEMLGGYLHFSASKSVIELIKKLRGQLDKLLNRKIEEPGFDISGEGKVVVAA
AVELLHNQNMR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactgccttttccgccctacttttcattcccatcacttcttctccatacacccg
cacgcacccaagcatttcctctccaacactctaatctccacttccgtcatgtcctaccgc
cctaactaccaaggcggaggccgtagaggcggcgcatcatcctccggtcggggtggaggc
cgtcgtggaggaggcggcggcgggggccgtggtggtggtggacgcggtgagcaaagatgg
tgggaccctgtttggcgtgctgagcgtcttagacaacaacaagcagagaaggaggtgctt
gatgagaaagaatggtgggataagatagagaagatgaaaaaaggaggggaacaggagatg
gttataaagcgttacttcagtattgcagaccagcaagccctagctgatatggctcatcaa
cacgagctttatttccatgcatataataagggaaagactcttgttgttagcaaagttcct
ttgcctgattaccgtgcagaccttgatgagcgtcatggatcaacacagaaggagattaaa
atgtccacagacatagagaggagagtaggaaatcttttaaatatgtcacagtcaactggg
acatctgctgctagtctggcttctgtatcaactgatatggaacataaaatatcaacaacg
gccataaaatctgcttcacagcagactggtacttcaacagagaaactcagtgttgcactc
aaggaaaggcaggaactggagcagacacgggatattgtgcaggaaatgaaatcatttagg
gagaagcttcctgcatttaaaatgaagtctgagtttctgaaagccgttcaagaaaatcag
gtattggtagtttcaggagagacaggctgtggcaaaacaacacagctgccacaattcatt
ttggaagaagaaatatctcgtttgcgtggagctgactgcaacataatttgtactcaacct
cgacgtgtatctgcaatttctgttgcagctcgtatatctgccgaaagaggggaaactctt
ggcaaaactgttggataccacatccgacttgaagcaaaacgttctgcggaaacacgcctt
cttttctgcaccactggtgtattacttcggcaactggtccaagatccagagttgactggt
gttagtcatttgctggtggatgaaattcatgaaagaggcatgaatgaagacttcttaatt
ataattttacgtgaccttcttccccgtcgtcccgatctgcgcctcattctaatgagtgct
acaatcaatgctgatttgttctctaaatactttgccaatgccccaacaatgcacataccg
ggatttactttccctgtagccgagcactacctagaagatgtgttggagaaaactagatat
agcatcaagtcggagtttgacagttttgaggggaatgcaagaagaaaaaggaaacaacaa
gattctaagaaggatcctctgatcgaaatgtttgaggaccttgatgtggatactcattac
aaaaattacagcttgggtgttagaaaatcccttgaagcttggtcaggttcacaaattgat
ttgggtctggtagaagcaacaattgaatatatatgtcggaatgaaggtggtggagctatt
cttgtatttcttactggctgggatgaaatctctaagctacttgacaaacttgaaggaaat
aacttacttggaaaccgtagcaagttcttaatccttccaatacatggttcaatgcctacc
attgaccaatgtgaaatatttgaccgtcctccccctaacaaaagaaaaattgtgctagca
acaaatattgctgagagcagcatcaccatagatgatgttgtatatgtcatagactgcggt
aaagcaaaggaaaccagctatgacgctctaaataagcttgcctgcttgttgccatcatgg
atttcaaaggcttcggcacgtcagagacgtggacgtgctggtcgagttcaacctggagtt
tgttataggttgtatccaaaactgattcacgatgctatgccagagtatcagttacctgaa
atcctccgaacacctttgcaagaattgtgcctgcacattaaaagcttgcagctgggaact
gtggcatcatttttaggaaaggcacttcagccaccagattctcttgctgttcaaaatgct
atagaacttctgaagacaattggggcgttagatgacagggaggagcttactccactgggt
cggcatctttgtacggtacctttggacccaaatatagggaagatgcttctcatgggctct
atctttcagtgccttagtcctgccttaactattgctgctgctcttgcttacagaaaccca
tttgtcctacctataaacagaaaagaggaagctgatgcagcaaaaagatatttttctggc
gactcttgcagtgatcatatagcccttcttaaagcttttgaaggatggaaggaagcaaaa
agtaggggggctgaaaaggaattttgttgggaaaatttcctatccccggtgaccttgcgg
ttgattgatgatatgagaacgcaatttctcaacttattatctgacattggatttgttgac
aagtcgaggggtgtccatgcttacaaccagtacagtcacgatttggagatggtttgtgca
attctttgtgctgggctctaccctaatgttgtgcagtgcaaaagaagaggaaaacggaca
gcattctacactaaagaagttgggaaggttgacatccatccctcttctgtaaatgctggg
attcatctcttccctctgccttacttggtatatagtgaaaaagttaaaacaagcaacatc
tatattagagactctaccaacatttcagattatgcactacttctgtttggtggtaatctc
gaccctagcaaaaatggcgagggtattgagatgcttggaggttaccttcatttctctgct
tccaagagtgtcattgagttgataaagaaattacgcgggcagcttgacaagcttctaaac
agaaaaattgaagaaccagggtttgacatttctggtgaaggaaaagtagtggttgctgct
gctgttgaattgcttcataatcaaaacatgcgatag
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integrated database retrieval system
