Vicia villosa (hairy vetch): 131635355
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Entry
131635355 CDS
T09680
Name
(RefSeq) cleavage stimulation factor subunit 50-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131635355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131635355
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
131635355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Cytochrom_D1
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_VPS8
Beta-prop_SCAP
KNTC1_N
Beta-prop_IFT122_1st
Beta-prop_NOL10_N
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_WDR41
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
131635355
NCBI-ProteinID:
XP_058761955
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MENSSSEQTVQDGKLFRHLNSLIVAHLRHSNLTQAATAVASATMTPLNVEAPSNKLLQLL
AKGLAAEKDDVSRGTSSSPFQDLGASLPLPRPGATAVDFSSSADLKGSSKSFPKHETRHL
SEHKNVARCAKFSPDGRFVATGSADTSIKLFEVSKIKQSLLPDAKDAPVRSVLKTYYDHT
QPINDLDFHPQGTILVSGAKDQTIRFFDVSKANAKRSYRVIQDTHNVRSVSFHPSGDFLL
AGTDHAIPHLYDINTFQCYLSANVPDNSPNGAINQVRYSGTGSMYVTASKDGAIRLWDGI
TANCVRSITAAHATAEATSAIFTRDQRFVLSCGKDSTIKLWEVGTGRLVKQYLGATHTQL
RFQAIFNATEEFILSIDELNNEVTIWDAMTTEIVAKWPSNHVGAPRWLEHSPVESAFISC
GTDRSIRFWKEV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagtagctcggagcaaactgtgcaagatggcaaactcttcagacacctcaat
tctcttatcgtcgctcatcttcgtcacagcaatctcactcaggctgctactgctgttgct
tctgcaactatgacaccattgaatgtagaagccccttccaacaagcttcttcaattgctt
gctaagggtcttgcagcggaaaaggatgatgtgtcaagagggacttcatcttctcccttt
caagatttgggtgcatcattgcccttgcctcgtcccggtgcaacagccgttgatttcagt
tcttcggcagatttaaaaggttcgtcaaagagtttcccgaagcatgagacacgccacctt
tcagaacacaagaatgttgccagatgtgctaagtttagtcctgatggaaggtttgttgcc
accggaagtgcagatacatcaattaagctatttgaggtttcaaagattaagcagtcgttg
ctcccagatgcaaaggatgctcctgtgcggtctgttttgaaaacatattatgaccataca
caaccaataaatgatctggattttcatccgcaaggtactatcctggtttctggagccaaa
gatcagacaataaggttttttgatgtttcaaaagccaatgctaagagatcatacagggtt
atccaggatacacacaatgttcgctctgtatcttttcacccctcaggggactttctgttg
gcagggactgatcacgcgattccccatttgtatgatataaatacctttcagtgttatctg
tcagcaaatgttccagataatagccctaatggagccataaaccaggttagatattctggt
acaggttccatgtatgttacagcatctaaagatggtgctattcgactgtgggatggcatc
actgccaactgtgtgcgctcaataactgcagcacatgcaacggcagaagctaccagtgca
attttcacaagagatcaaaggtttgtcctctcatgtgggaaggactccaccataaagctt
tgggaggttggcactggaagattagtcaaacaatatctcggtgccacgcatacacaacta
agattccaggctatttttaacgcgacagaagaatttattctatccatagatgaactcaac
aacgaggtcactatctgggatgcaatgacaacggaaatagtagcaaaatggccttctaat
catgttggtgcaccgcgctggcttgaacattccccagtagagtctgcttttatttcatgt
ggaactgatagatcaattcggttctggaaggaggtttaa
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integrated database retrieval system
