Vicia villosa (hairy vetch): 131636484
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Entry
131636484 CDS
T09680
Name
(RefSeq) exosome complex component RRP45A-like
KO
K03678
exosome complex component RRP45
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131636484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131636484
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131636484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131636484
NCBI-ProteinID:
XP_058763079
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MEQRLANCWRLTVNEKKFIESALLSEVRVDGRGPLDYRKLNIKFGRDNGSAEVQLGETRV
MSFVSGQLVQPYRDRPNEGTFSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA
IDTESLCILSAKLVWAIRVDIHILDNVGNLVDAANIAALASLMTFRRPECSLGGDDGQQV
VVHPPEVREPLPLIIHHLPIAVTFGFFSNENLVVLDPTYHEEAVMTGRVTATLNANGDVC
SIQKPGGQGVSQRVIMYCLKLAHVKAGDITAKIKDAVEKRNTERALQKIKRHSSSVAVDV
YGTTARLAPKQNQSYADKDGRHLAPLKLKDEANFMECEAASSEKVQNSKKDESSKNFIGG
PSSWDPYSECVNSDLLKSSLASRGQSTPSKRKDSRRETKPEEPAQEIKADSEPIDPALTA
GQSNEGKTLNDAVKPKNKRKKKASSNNGN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaagattagctaattgttggcggttgacagttaatgaaaagaaattcatcgaa
agtgctctgctatcagaggttcgagtggatggtcgtggcccgttggattatcgcaagtta
aacattaaatttggaagggataatggatccgcggaggtccaattgggtgagacgcgtgtg
atgagttttgtgagtggacaacttgtgcagccttacagagataggcctaatgaaggcaca
ttttccatcttcactgaattctctcccatggctgatccttcctttgagcctggccgtccg
ggagagtctgccgttgagttaggacgcattatagaccgtggtttacgggaaagcagagcc
attgacactgaatcgctctgcattctttcagccaaacttgtatgggccattcgcgttgat
atccatatactggacaatgtagggaatcttgttgatgctgcaaatattgctgcactggct
tctctgatgacattcagaagacctgaatgctctttggggggagacgatggtcaacaagtt
gtagtgcatcctcctgaggtgcgcgagccacttcctttgatcatacatcatcttcccatt
gctgtcacctttggatttttcagtaacgaaaatcttgtggtcttggatccgacataccat
gaagaggctgtaatgactggacgcgtgactgcaacacttaatgcaaatggtgatgtttgt
agcattcaaaagcctgggggacagggggtctctcaacgggttatcatgtattgcttgaaa
cttgctcatgttaaagcaggtgatattacagccaagataaaggacgcagttgaaaagcgt
aacactgaaagagcactacagaagattaagcgccattcttcctctgtagccgtggatgta
tatggtaccactgccagattagctcccaaacaaaatcaatcgtatgctgataaagatggt
aggcatctagccccattgaagctaaaagatgaggcgaattttatggaatgtgaagctgcg
tcatcagaaaaagtacagaatagcaagaaggatgaaagctcaaagaatttcattggcggt
ccctcaagttgggatccttactcagagtgcgtcaattcagatcttctaaaatcttctcta
gcttctcgtggacaatcaactcctagtaaacgaaaggattcaagacgggagactaagccg
gaagaaccagcgcaggaaatcaaggcagattctgaaccaattgacccagctctaactgct
gggcagagtaatgaaggtaagactctgaatgacgctgtgaagcccaagaacaagaggaag
aaaaaagcatcttccaataacggaaattaa
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