KEGG   Vicia villosa (hairy vetch): 131637090
Entry
131637090         CDS       T09680                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03030  DNA replication
vvo03410  Base excision repair
vvo03420  Nucleotide excision repair
vvo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131637090
   03410 Base excision repair
    131637090
   03420 Nucleotide excision repair
    131637090
   03430 Mismatch repair
    131637090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvo03032]
    131637090
   03036 Chromosome and associated proteins [BR:vvo03036]
    131637090
   03400 DNA repair and recombination proteins [BR:vvo03400]
    131637090
DNA replication proteins [BR:vvo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    131637090
  DNA Replication Termination Factors
   ELG1-RFC complex
    131637090
Chromosome and associated proteins [BR:vvo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    131637090
DNA repair and recombination proteins [BR:vvo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     131637090
  Check point factors
   HRAD17(Rad24)-RFC complex
    131637090
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 Mg_chelatase Rad17 AAA_16 AAA_lid_RFC1 Viral_helicase1 nSTAND3 RuvB_N AAA_11 AAA_5 AAA_28 AAA_19 RCF1-5-like_lid MeaB AAA_25 AAA_30 RNA_helicase AAA_assoc_2 AAA_18 AAA_3 IstB_IS21 ABC_tran DNAX_ATPase_lid bpMoxR AAA_24 KTI12 NTPase_1 SLFN-g3_helicase AAA_7 T2SSE AAA_29 NPHP3_N DNA_pol3_gamma3 DO-GTPase1
Other DBs
NCBI-GeneID: 131637090
NCBI-ProteinID: XP_058763636
LinkDB
Position
LG1:48913230..48919684
AA seq 332 aa
MASSSSTNSANYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRL
MVVVQAEKVPYVPEGLEAIIFTADGDMRQGLNNLQATYSGFQFVNQANVFKVCDQPHPLH
VKNMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKFSLVRETAKAP
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcatcatcatcctccaccaacagcgcaaactacgacgtgccgtgggttgagaagtac
cgtcccagcaaggtcgtcgacatcgtcggcaatgaagacgccgtctcccgtcttcaagtc
atcgctcgtgacggcaacatgcccaacctcattttatcaggtcctcctggaactggaaaa
accactagtatactcgcccttgcgcacgagcttctcggtcctaattatagagaagctgtt
cttgaactaaatgcatcagatgatagaggaatagatgttgtgaggaacaagatcaagatg
tttgctcaaaagaaagtaacacttcctccggggagacacaaagttgttatactcgacgaa
gctgacagtatgacatctggagcacaacaagctttaagaaggacgatggagatatattct
aattctactcgtttcgcgcttgcttgtaatacatcggctaagattattgagccaattcag
agtaggtgtgcaattgtgagattttcaagactatctgatcaagagatacttggtcgtctc
atggtcgtggttcaagctgagaaggttccctacgtccctgaaggactcgaggctatcatt
ttcactgctgatggtgatatgagacagggattgaacaacttgcaagcaacatacagtggg
tttcagtttgtaaaccaagcaaatgttttcaaggtttgtgaccagccacacccactgcat
gtgaagaatatggtgcgcaatgtaattgaagggaatttcgatgaggcttgttccggcctc
aagcaattgtatgacttgggatattcgcctacagatatcatcaccacactttttcgtatc
ataaaaagttatgatatggcagagtacttgaaattagaattcatgaaggaaactggattt
gctcatatgaggatttgtgacggagttggttcttatcttcagatgtgtggtctactggcc
aagttttctctagttcgcgaaactgctaaagctccatga

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