Vicia villosa (hairy vetch): 131642717
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Entry
131642717 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131642717
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131642717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131642717
03041 Spliceosome [BR:
vvo03041
]
131642717
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131642717
Spliceosome [BR:
vvo03041
]
Complex B
Other components
Prp19-related factors
131642717
Complex C
131642717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
Mad3_BUB1_I
TPR_15
TPR_19
Motif
Other DBs
NCBI-GeneID:
131642717
NCBI-ProteinID:
XP_058768920
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MAISQELYPSENDLVYEEELLRNPFSLKSWWRYLIALSDSPFNKRFIIYERALKALPGSY
KLWHAYLRERLQIVRSYPIILPQSKTLNDTSERTHPQFKILNDTFKRALITMHKMPRIWI
MYLQTLTHQKLITRTRQTFDLALRALPVTQHGRVWDHYLFFVCQKGIPIETSLRVYRRFL
QFDPNRVEDFIEFLISSGLWQEAAERLASVLNDDKFYSIKGKTKHRLWLELCDLLTRHAN
EVSGLNVDAIIRAGIKKFSDEVGPLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVKDFS
VIFDSYSQFEESVICYKMEMMDTEDEDNEEEEEGDDEDIRFKYEHFEKKILSGFWLNDID
DIDLRLGRLEYLVDRRPELANSTILRENPHNVEQWHRRVKLFEGNPTKQILTYVQAVRTV
DPMKAVGKPHTLWTAFAKMYEQHDDLASARLIFDKAVQVNYKTVDNLASVWCEWAELELK
HRNFKGALELMRLATAEPSVEVKLKVAADGNQPVQMRLHKSLRLWTFYADLEECLGNLES
TRAVYERMLDLQIATPQVIINYAYFLEENNFFEDAFKIYERGVKIFKYPHARDIWVTYLS
KFVKRYGKAKLERARELFENAVEMAPADQVKPLYLEYAKLEEDYGLAKRAMKVYDQATKA
VPNNEKLSMYEIYIARAAEILGVPKTREIYEQAIESGLPDKDVKAMCLKYAELERSLGEI
ERARGIYVFASKFADPRTDPDFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFIL
PENLMPKDQAVCLDEAKDKLKEAGNTDDEMAGLERQLAPAANKTVTKERKVGFVSVGVES
QPDGRIKSNANHEEIDLPEENNSDDEDHNEIAQKDVPSAVFGGLIRKRDEMENDGEVDGS
NLLGALERIKKLKRI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctcaagagctttatccttcagaaaatgatttggtttacgaagaggaattg
cttcgcaaccctttcagtcttaaatcatggtggcgatatctcatcgctctttcagattct
ccattcaacaaacgttttatcatctacgaacgagcactcaaagctcttcctggaagctat
aagctctggcatgcttaccttcgcgaacgcctccaaatcgttcgcagttaccccattatt
ctcccgcagtccaaaacccttaatgacacttccgaacgtactcacccgcagttcaagatt
cttaatgacacttttaaacgtgctctcattaccatgcacaagatgcctcgtatatggata
atgtatcttcaaacattgacgcatcaaaaacttataacacgcacaagacaaacctttgat
cttgctctccgtgcacttcccgttactcaacacggtcgcgtttgggaccattatctgttc
tttgtttgtcaaaagggtattccaattgaaacctctcttagggtttatcgcaggttcttg
caatttgaccctaatcgtgttgaagattttatcgagttcttgattagttctggtctttgg
caagaagcggctgagaggttggcttcggtgttgaatgatgataagttttattctattaag
ggtaaaacgaagcataggctttggttggagttgtgtgacttgttgactaggcatgcgaat
gaagtttctgggttgaatgtggatgcaatcattagggctggtattaagaaattctcggat
gaggttggtccattgtggacctcgcttgctgagtattacattaggaggggtttgcatgag
aaggctagggatgtctttgaggagggtatgtccactgtcattactgtaaaggatttcagt
gtcatatttgattcctattctcaatttgaagagagtgtgatttgttataagatggaaatg
atggatactgaagatgaggataatgaggaggaggaggagggtgatgacgaagatattcgt
ttcaaatatgaacactttgagaagaagattttaagcgggttttggttgaacgacatagat
gacattgacttgagattaggtaggttagagtacctggtggataggaggcctgaattggct
aatagtacaattttgcgtgaaaatcctcacaatgtggaacaatggcacagaagagtgaag
ctttttgagggtaatcccactaagcagatactcacttatgtccaggctgtgaggactgtt
gatcccatgaaggcagtgggaaaacctcatacattatggacagccttcgcaaaaatgtac
gaacagcacgatgatctagccagtgctcggcttatttttgacaaggcagtgcaggttaac
tacaagactgtggataatctggctagtgtctggtgtgagtgggctgaattagaattgaaa
cataggaatttcaaaggagcacttgagcttatgagactggctactgcagagccatcagtc
gaggttaaactaaaagtggcggctgatgggaatcaaccggttcagatgagacttcataaa
tccttgagattgtggacattttatgctgatttggaggaatgtctaggtaatttggagtct
actcgggcagtttatgaacggatgttggatttacaaatagccacaccacaagtaataatc
aattatgcatactttctggaggagaacaacttctttgaagatgcttttaagatttatgaa
agaggagtgaagatatttaagtacccacatgctagagatatttgggttacatatctgtct
aaatttgtgaagagatatggaaaggcaaaattggagagagcgagagagctgtttgagaac
gcagttgaaatggccccagctgatcaagtgaagcctctttatcttgagtatgctaagctg
gaggaggactacggactagcaaaacgagctatgaaggtttatgatcaagccacaaaggct
gttcccaacaatgagaagttgagcatgtatgaaatatatattgctcgtgcagctgagata
ttaggtgtacccaaaacacgagagatctatgagcaggcaattgaatctggtcttccggat
aaggatgtcaaagctatgtgtttgaagtatgccgagctggaaagaagtttgggagaaatt
gagcgtgctcgtggtatatatgtttttgcttcaaagtttgctgatccacgaaccgatcca
gacttctggaataaatggcatgaatttgaggttcagcatggaaatgaggatacatttaga
gaaatgcttcgaattaaacggagtgtgtctgcaagctacagccagacacattttatactg
cctgagaatctgatgccgaaggatcaagctgtgtgtcttgatgaagccaaagacaaactt
aaagaggctgggaacactgacgatgaaatggctggtttagaaaggcaattagcccctgcc
gctaacaaaacagtgacaaaagagagaaaagttgggtttgtaagtgttggagtggagtca
cagcctgatggaaggataaaatctaatgcaaaccacgaggaaattgacttaccagaagaa
aacaattccgatgatgaagatcataatgagattgcacaaaaagatgtcccttctgctgtt
tttggcggtttgattagaaagagggacgagatggaaaatgatggagaagtagatggtagt
aatctgcttggtgcccttgagagaattaagaagctgaaaaggatttaa
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