Vicia villosa (hairy vetch): 131643531
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Entry
131643531 CDS
T09680
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131643531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131643531
Spliceosome [BR:
vvo03041
]
Common components
Common spliceosomal components
SR proteins
131643531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
131643531
NCBI-ProteinID:
XP_058769760
LinkDB
All DBs
Position
LG1:91915878..91920698
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AA seq
425 aa
AA seq
DB search
MKAIFCGNFEYDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDADAAIRALDRIEF
GRKGRRLRVEWTKQERGIRRPAERPKRSSRDGRPSKTLFVINFDTNHTRTRDLERHFEPY
GKIVSVRIRRNFAFVQYESEDDASKALEATNMSKLLDRVISVEFAARDDDVRRNGHSPER
SHDRQRDRSRDGRRSPSPYRRERGSPDYGHGPSPYKRQRSSPDYGHGNSRSRSPYRRERG
SPAYVRRSISPYRRERDGSEPVRDNSRSPYHKERGRTNRSPSYSLEEGERIDPPKGHGSD
HSPEEGERTDPKKDHGSDHSLEEGERIDPKKDHESDHSPYDAVKDSSENGHYKRHSTDAI
GNSSPYNDSRGSPRPDAKVDPKPYNDYGGSPNTMPEPRHSPNYGGPESPIREQYRSQSQS
PPAEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaattttctgtggaaattttgaatatgattgccgggagtctgagctggagcgg
ctttttagacgatatggcaaggttgatagggtggatatgaaggctggatttgcttttatt
tatatggaagatgagagagatgctgatgctgcaattcgtgccctcgatcggattgagttt
ggtcggaagggccgtagactccgtgtagaatggacaaagcaagaacgtggtatccgaagg
cctgctgagcgcccaaaaagatcttcacgtgatgggagaccttcaaagaccttatttgta
attaattttgatacaaaccataccagaacaagggacttggagagacattttgagccatat
ggtaagatagtcagtgtgaggatcaggaggaattttgcatttgttcagtatgaatctgaa
gatgatgcttccaaagcactggaagctacaaatatgagcaagttgttggatcgggttatt
tcagttgaatttgctgctagagatgacgatgtcaggcgaaatggacatagcccggagaga
agccatgatcgtcagcgtgacagaagccgtgatggaaggcgatcacccagtccttatcgt
agagaaaggggtagtcctgattacggccatgggcctagtccatataagaggcagaggagc
agccctgattatgggcatggcaacagccgtagtagaagcccctatcgaagagagcgaggt
agccctgcttacgtgcgtcgaagcattagtccttacagaagagagagggatggttctgag
cctgttcgtgacaacagccgcagtccttatcacaaagagcgggggagaaccaaccggtct
ccctcttatagtctcgaagaaggagagaggatagaccctccaaaaggtcatggatctgac
catagtcctgaagagggagagaggacagaccctaaaaaagatcatgggtctgaccatagt
ctcgaagagggagagaggatagaccctaaaaaagatcatgaatctgaccatagtccttat
gatgctgtgaaggatagctctgaaaatggccattacaagaggcacagtactgatgcaatt
gggaactccagcccatacaatgattctagagggagtcctaggcctgatgcaaaagtggac
cccaaaccatacaatgattatggagggagcccaaatactatgcctgaacccagacacagt
cccaactatggtggtcctgaaagtcccattcgtgaacagtatcgcagccagagccagtca
ccccctgcagaagaatga
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