KEGG   Vicia villosa (hairy vetch): 131644008
Entry
131644008         CDS       T09680                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03018  RNA degradation
vvo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131644008
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131644008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvo03019]
    131644008
   03041 Spliceosome [BR:vvo03041]
    131644008
Messenger RNA biogenesis [BR:vvo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131644008
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131644008
Spliceosome [BR:vvo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    131644008
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 131644008
NCBI-ProteinID: XP_058770367
LinkDB
Position
LG1:complement(119623692..119628011)
AA seq 98 aa
MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDLSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcggctggacctggactagaatccctcgtagatcagacaatatcagtcattacaaat
gatggacggaatatagtgggtgtcctaaaaggctttgaccaggcgacaaatataattctt
gatgagtctcatgaacgagtttattctactaaggaaggtgtccagcagcttgttctaggt
ttatacatcattaggggtgacaacataagcgttgttggtgaactggatgaggatctagat
tccaacctagatttgtccaagcttagagcccatcccttgaagcccgtcatccactga

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