Vicia villosa (hairy vetch): 131644008
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Entry
131644008 CDS
T09680
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131644008
09123 Folding, sorting and degradation
03018 RNA degradation
131644008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131644008
03041 Spliceosome [BR:
vvo03041
]
131644008
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131644008
mRNA degradation factors
5'-3' decay
Lsm complex
131644008
Spliceosome [BR:
vvo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131644008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
131644008
NCBI-ProteinID:
XP_058770367
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Position
LG1:complement(119623692..119628011)
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AA seq
98 aa
AA seq
DB search
MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDLSKLRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctggacctggactagaatccctcgtagatcagacaatatcagtcattacaaat
gatggacggaatatagtgggtgtcctaaaaggctttgaccaggcgacaaatataattctt
gatgagtctcatgaacgagtttattctactaaggaaggtgtccagcagcttgttctaggt
ttatacatcattaggggtgacaacataagcgttgttggtgaactggatgaggatctagat
tccaacctagatttgtccaagcttagagcccatcccttgaagcccgtcatccactga
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integrated database retrieval system