Vicia villosa (hairy vetch): 131644071
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Entry
131644071 CDS
T09680
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131644071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131644071
Spliceosome [BR:
vvo03041
]
Common components
Common spliceosomal components
SR proteins
131644071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
131644071
NCBI-ProteinID:
XP_058770445
LinkDB
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Position
LG1:123269900..123274494
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AA seq
272 aa
AA seq
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MSGKSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD
AIYYRDGYDFDGYRLRVELAHGGRSSSSSVDRYSRHSGRSGSYGVSRRSDYRVLVTGLPP
SASWQDLKDHMRKAGDVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRA
YIRVREYDRSYSRSPSRDSRRSYSRSRSPYASRSRSRSLSHSYSGRSRSLSPKARHARRS
LSLSRSHTRSRSPSSSPRRYQSRSPSQSSRSM
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcaagtcaagtcgcactttatatgttggcaatcttcctggcgatattcgcttg
agagaagtagaggatcttttctacaagtatggtcctatcgttgacattgatttgaagatc
cctcccaaaccaccaggttatgcttttgttgagtttgaggatgctcgtgatgctcaggat
gcaatttactacagagatggttatgattttgatggttatcgattacgggttgaacttgca
catggtggacggtcaagttcatcgtcagtagatcgatatagtaggcatagcggtagaagt
ggtagctatggagtttccaggcgatctgactatcgtgttctggtgactggattacctcct
tctgcttcatggcaagacctgaaagatcacatgcgtaaagctggtgatgtgtgtttttct
caagtattccgggagcgtggaggcttgactgggatagtggattataccaattatgatgat
gtgaaatatgctatcaggaaacttgatgactctgaatttcgaaatgcattttctcgggca
tacatacgagtgagggaatatgatcggagttattctagaagccctagtcgtgattcaagg
aggagctattctcgaagccgcagcccatatgcatcacgaagtcgaagccgcagtctaagt
catagctacagtggcaggagcagaagtttgtctccaaaagcaagacacgctcgtcgctca
ttatctctctcaagatcccatacaagatccagatccccgagctcgtctcctagacgttac
cagagtcgcagtcctagccaaagttcaaggagcatgtaa
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