Vicia villosa (hairy vetch): 131645150
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Entry
131645150 CDS
T09680
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131645150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131645150
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131645150
Spliceosome [BR:
vvo03041
]
Complex A
U2 snRNP components
U2 related factors
131645150
Complex B
131645150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
131645150
NCBI-ProteinID:
XP_058771793
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All DBs
Position
LG1:250492183..250496459
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AA seq
1163 aa
AA seq
DB search
MDEVKHKSRKEDGDSKRSHRDRDRTGERGKDKDRSEGRHKDNREKRDRESRRHDREKSSD
SDDKHDREREKRRDVKEKDRVRVHEVEREKVRDRKRERDREEKEKERVREKERDREEKEK
ERVREREDKEKERLKEKERERERKEEKERIREKERVRERRDHEREKEKEKEKERDRDKGR
RGREREKHRDVDSENSDGELRERNRKRHKKEDEDYKGREKEKSSSKSNRKIEGIDGSPRR
KSDGDDSDSKDREKKPTREEEMEDEQRRLDDEMEKRRRRVQEWQELRRKKEEAEREKQGE
ASAAELESGKAWTLEGEESDDEDGTGKHTAMDVDEDEKPADKEPMESMVVDVDNGTVAPD
LQNGDIGAPSDEEIDPLDAFMNSMVLPEVEKLNNTVNSTPSDITSDLKPQDKGDGRSNGR
QSRKGSGKSIGRIIPGEESDSDYADPETDGDPVEEDDDEFMKRVKKTKVEKLSLVDHSKI
DYIPFKKNFYIEVKEISKMTLEEVALYRKQLELKIHGKDVPKPIKSWNQTGLTSKILDTI
KKANFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVLAGDGPI
GLIMAPTRELVQQIHSDIKKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMI
DILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQV
EILARKVLNKPVEMQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILIFVH
SQEKCDSLFKDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKE
LELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELSEQIVPD
DLKSLAAGFMVKVTQGLEQAHGTGYGGSGFKFNEEEDEERKAAKKAQAKEYGFEEDKSDS
EDEDDGIRKAGGDISQHPALAQIIAATKANAPSMSTPISATQLISNGGLPVSLPSVLGLQ
TATVLPGTGLPLATNDGAARAALAAINLQHNLAKIQSEALPEHYEAELEINDFPQNARWK
VTHKETLGPISEWTGAAITTRGQYFPPGKVAGPGDRKLYLFIEGPSEQSVKRAKVELKRV
LEDITNQALQLPGGTQPGKYSVV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtaaaacataaatcgagaaaagaagacggtgattcgaagaggagtcatcgc
gatcgcgatagaactggtgaaagaggtaaggataaggatagaagtgaaggtaggcataag
gataatcgggagaagagggatcgggagtctcgaagacatgatagagagaaaagtagtgat
tctgatgataagcatgatagagagagggagaaaaggagagatgttaaggagaaggatagg
gtgcgtgttcatgaggttgagagagagaaagtgagggataggaagagggaaagagatagg
gaagagaaagagaaggagagagtgagggagaaagaaagagatagagaagagaaagaaaag
gagagagtgagggagagggaagacaaggagaaggagagattaaaggagaaagaaagagag
agggaaagaaaggaagagaaggagaggattagagagaaagaaagggtgagggagaggcgg
gatcatgagagagagaaggaaaaagaaaaggaaaaggaaagggatagagataaagggagg
agaggacgagagagggagaagcatagagatgttgatagtgaaaacagtgatggtgagttg
agggagaggaatcggaagcggcataagaaagaggacgaggattataaggggagagagaag
gagaaaagttctagcaaatcaaacaggaaaattgagggaattgatggaagtcctagaaga
aagagtgacggggatgactcggattctaaagacagagagaaaaaacctacccgtgaggag
gagatggaagatgaacaaaggaggttagatgatgaaatggaaaaacggaggagaagagtt
caagagtggcaggagttaaggaggaagaaggaagaggcggaaagagaaaagcaaggtgaa
gcaagtgctgctgaacttgagtcgggaaaggcttggacacttgaaggggaggaatctgat
gatgaagatggaacaggtaaacatactgctatggatgtagacgaagacgaaaaacctgct
gataaggaacctatggagtcaatggtggtagatgttgacaatggaacagttgcgcctgat
ttacaaaatggagatattggtgctccttcagacgaggaaatagacccattggatgctttt
atgaattctatggttcttcctgaggttgaaaagctgaacaatactgttaactcaacacct
tctgatataacttctgacttgaaaccccaagataaaggggacgggcgtagtaatggcaga
cagtcaaggaaaggttcagggaagtctattggcaggataattcctggcgaagagtccgac
tcagattatgcagatcctgaaactgacggggatccagttgaagaagatgatgacgagttc
atgaaaagagtgaagaaaacgaaagttgaaaaactttctttagttgaccactcaaagatt
gactatataccgttcaaaaagaatttctatattgaagtgaaggagatctcaaagatgact
cttgaagaagttgctttatacaggaagcagttagagttaaagatacatggaaaggatgtg
cccaagcctataaagtcatggaaccagactggacttactagcaaaattttggatacaata
aagaaggcgaactttgaaaagccaatgcctattcaagctcaagcgttgcctgtaattatg
agtggccgagattgcataggcattgccaaaaccgggtctggtaaaacacttgcttttgtt
ctgccaatgttgaggcatatcaaggatcagccaccagttcttgcaggagatggacctatt
gggcttattatggcccctacaagagagcttgttcaacagattcacagtgatataaagaag
tttacaaaggtaatgggtatcaggtgtgtccctgtctatggaggctctggtgttgctcaa
caaatcagtgagttgaaacgtggtactgagatagtggtttgtactccaggtaggatgatt
gacatactatgcaccagtagtgggaaaataactaatttgcgtagagtcacctatctggta
atggatgaggcagatcgaatgtttgacatgggctttgaacctcaaatcacgagaatagtt
caaaatattcgaccggatcgtcaaacagtgcttttctctgctacttttccccgccaggtt
gaaattttagctcgcaaggttttgaataaacctgttgaaatgcaagttggtgggaggagt
gttgtgaacaaagatattgcacagttagttgaagtgaggccagaaaatgagaggttccta
cgactcttggaactactcggagaatggtacgaaaagggaaagattttaatatttgtccac
tcacaggagaaatgtgattccttgttcaaggatctactcaggcacggttatccttgtctt
tctcttcatggagctaaggatcaaacagaccgtgaatccacaatatctgattttaaaagc
aatgtttgcaatttgttggttgcgacaagtattgctgctaggggattagatgtcaaggag
ctagaattggtgatcaattttgatgttccaaaccactatgaagactacgtacatcgtgtt
gggcgcactggtcgtgctggccggaaaggttgtgccatcacatttatttcggaagaagat
gcaagatatgcaccagatctggtgaaagcattggagctatctgagcagattgttcccgat
gatctgaaatcccttgccgctggctttatggtgaaagtgactcaaggactggagcaagcc
catgggactggttatggaggcagtggctttaaatttaatgaagaagaagatgaggaaagg
aaagcagcaaagaaagctcaagccaaagaatatggatttgaagaagacaagtcagattct
gaagacgaagatgacggtattaggaaggcaggaggtgatatctcacagcaccctgctctt
gctcagattattgctgcgacaaaagcaaatgctccctcaatgtctactcccatctctgca
acccaactgatttcaaatggtgggctacctgtttctttgccttctgttcttggtctccag
actgcaacagtcttgcctggaacaggactaccccttgctacaaacgacggggcagctcga
gctgcactagctgctataaacctgcagcacaacttggcaaaaatacaatctgaagcattg
ccagagcattatgaggccgagctggaaataaatgatttccctcagaatgctcgctggaaa
gtcacacacaaggaaactttaggccccatttcggagtggaccggagctgctattaccacc
aggggacagtatttcccacctggcaaagtcgcaggacctggggatcgcaaactctatttg
ttcattgagggtcctagtgagcagtcagttaaaagagccaaagtagaattgaagcgtgtt
ttggaagacatcactaatcaggctttgcaactacctggtggaactcaaccaggcaaatac
tctgttgtataa
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integrated database retrieval system
