Vicia villosa (hairy vetch): 131645821
Help
Entry
131645821 CDS
T09680
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03015
mRNA surveillance pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131645821
09122 Translation
03013 Nucleocytoplasmic transport
131645821
03015 mRNA surveillance pathway
131645821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131645821
03041 Spliceosome [BR:
vvo03041
]
131645821
03009 Ribosome biogenesis [BR:
vvo03009
]
131645821
03012 Translation factors [BR:
vvo03012
]
131645821
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131645821
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131645821
mRNA cycle factors
Stress granule specific factors
131645821
Spliceosome [BR:
vvo03041
]
Complex C
Other components
EJC/TREX
131645821
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
90S particles
Helicases
131645821
Translation factors [BR:
vvo03012
]
Eukaryotic type
Initiation factors
eIF-4
131645821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
131645821
NCBI-ProteinID:
XP_058772009
LinkDB
All DBs
Position
LG2:8144886..8146797
Genome browser
AA seq
386 aa
AA seq
DB search
MEFETREGVKAIGSFEEMITKDDLLRGIYQYGFEKPSAIQQRAIVPIIQGRDVIAQAQSG
TGKTSMIALTVCHVVDTSVNEVQALIVSPTRELASQTEKNILAIGDYINIRSHACIGGKS
MGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLPTRAIKLLFLDESDEMLSRGFKDQIYDLY
RYLPPDLQVVLISATLPHDVLEMTNKFMDDPVRVLVKRDELTLERIKQYFVEVEREEWKF
DTLCDLYDTLTISQAVIFCNTKQKVDWLSKQMYNNNFTVSSMHGDMPQRERDAIMKEFRA
GTTRLLITTDVWARGLDVQQVCTVINYDLPNNRELYIHRIGRSGRFGRKGVALNFVKSHE
VTIMRDIEQYYSTQIEELPMNVADVL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgagacaagggagggtgtgaaggcaattggaagtttcgaggagatgataaca
aaagacgatttacttcgcgggatctaccaatatggtttcgagaaaccgtcggcgattcaa
caacgtgccattgtgcctatcattcagggtcgtgacgtcatcgctcaggctcaatctgga
accggaaagacctccatgattgccctaactgtttgccatgttgttgacacatccgtcaat
gaggtgcaggctttaattgtttctccaactagggagcttgcctctcaaactgaaaagaat
atattggctatcggggattacataaatatacgatcccatgcttgcattggaggcaaaagt
atgggagaagacataaggaaacttgaacacggagttcatgtagtgtctggaactcctggt
cgagtatgtgacatgatcaaaaggagaacattgcccacaagagctatcaagttgctattt
ttggacgaatctgatgaaatgctgagcagagggtttaaagatcaaatttatgatttgtac
agatatctcccacctgatcttcaggttgtcttgatttctgctactttacctcatgatgta
ctggagatgacaaataagttcatggatgatcctgtgagggtccttgtaaaacgtgacgag
ttgacattggagcgcatcaagcaatattttgttgaggttgagagggaggaatggaagttt
gatactctgtgtgatctttatgacacacttactatatctcaagctgttatattctgcaac
accaagcaaaaggtggactggttatccaaacaaatgtataacaataatttcaccgtgtca
tcaatgcatggtgacatgcctcagagagaaagagatgcaataatgaaggaatttcgtgct
ggaacaactcgtttattaataacaacagatgtttgggctcgtggccttgatgtacagcag
gtttgtacggttatcaattatgaccttccaaataatcgagagttgtatattcataggatt
ggccgttcgggacgttttggacgaaagggcgttgcattaaattttgtcaaaagtcatgaa
gtcaccatcatgagagatattgaacaatactatagtactcagattgaggaactgccaatg
aatgttgctgatgttttgtaa
DBGET
integrated database retrieval system
