Vicia villosa (hairy vetch): 131646259
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Entry
131646259 CDS
T09680
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03410
Base excision repair
vvo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131646259
03450 Non-homologous end-joining
131646259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131646259
Enzymes [BR:
vvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131646259
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
131646259
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
131646259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
HHH_5
NTP_transf_2
Cdd1
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
131646259
NCBI-ProteinID:
XP_058772336
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All DBs
Position
LG2:complement(69328427..69333566)
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AA seq
560 aa
AA seq
DB search
MAAKTKAATKHQCDPHGMFEGMIVFFVAKGVQSRRLQIWKQRMMQMGAVIEERFSKRVTH
VFAIDSQTLLHEFDSHRLLRFKGVRFFNLYWIQLYVALPLCKRVLQYQWLEESLKSGEKL
SEDLYVLNLDPQGEGINEHDKSLDSKSTDGSISSEPQQLQNKKIKASSEDIEIVNLYSNG
DKKENAPLSSTSTTNSHGGNESLNNAERSSQHLDAEYENEASSLPYCPPDLNKNITEIFG
KLVNIYRALGEDRRSFSYYKAISVIEKLSFKIESADQIKNLPSIGKSMKEHIQEIITTGK
LSKLEHFETDEKVQTISLFGEVWGVGPATALKLYDKGYRTLDDLRNDDSLTNAQKLGLKY
FDDIRQRIPRHEVQEMERILQKVGEDILPGAIIICGGSYRRGKATCGDIDIIITHPDGTS
HKGFLPKFVKRLKDMNFLREDLIFSTHSEKGDDSGVDTYFGFCTYPGRELRHRIDLKVYP
RDIYAFGLVAWTGNDVLNRRLRLQAESKGFRLDDTGLFPAIQGSGGKRGTKGTANMKLYT
EREVFDFLGFPWLEPNERNL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaagacaaaagctgcaacgaaacaccaatgtgatcctcacggaatgtttgaa
ggaatgattgtcttctttgtcgccaaaggagttcaatctcggagattacagatttggaag
cagaggatgatgcaaatgggggctgtgatagaagagcgcttctcaaaacgtgttactcat
gttttcgctatcgactcacaaacccttctacatgaattcgatagccaccgcttgttacgt
tttaaaggggttcgcttttttaatttgtactggattcagttatatgtagcacttccacta
tgcaagagagttctccaatatcaatggctggaggaaagtttgaagtcaggggagaaatta
tctgaggatctgtatgtactgaatttggatcctcaaggggaaggtatcaatgaacatgac
aagtctttggattccaagtcaactgatgggagcatttctagcgaacctcaacaattacaa
aataagaagatcaaagcatcttctgaggatatcgaaattgtaaacctttatagtaacgga
gataaaaaagaaaatgcaccactttcatcaacaagcacgacaaacagtcacggtggaaat
gagagtttaaataacgctgagagaagttcacaacaccttgatgctgaatatgaaaatgag
gcatcgtccttgccgtactgtccacctgatctaaacaagaacatcacagagatatttggg
aaacttgtgaatatatatagagcattgggggaggaccggagatcgtttagctattacaaa
gctatttcggtgattgagaagttgtcatttaaaattgaaagtgcagatcagataaaaaac
ctcccgtcaattggaaaatcaatgaaggaacatattcaggagataatcactactgggaag
ttatcgaaattggaacactttgaaactgatgaaaaggtgcaaacaatatctttatttgga
gaagtttggggtgtaggcccagccacagctctgaaattgtatgacaaagggtaccgtaca
ttagatgatcttaggaatgatgattcacttacaaatgcacagaagttaggattgaaatac
ttcgatgatatcaggcaacggattccacgccatgaggttcaagagatggaacgcattttg
cagaaagttggggaggatattttacctggggctatcattatttgtggaggatcatatcga
cgcgggaaagctacctgtggggacattgatatcattataacacatcctgatggaacaagt
cacaaaggatttttgcccaagtttgtcaagcgtttaaaggatatgaatttcctgagggaa
gatttaatttttagtactcatagtgaaaagggcgatgattctggtgttgacacatacttt
ggtttttgcacttatcctggacgggagttgcggcatcgtattgatttaaaggtataccca
agagacatatatgctttcggacttgtagcttggaccggaaatgatgtattaaataggaga
ttgaggctgcaagcagaatctaaaggattcaggcttgatgatacagggttgtttcctgct
attcagggttctggtggcaaacggggcacaaaaggtactgcaaatatgaaattgtataca
gaaagggaggtgtttgatttcctgggttttccttggcttgaaccaaatgaaagaaatctc
taa
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