Vicia villosa (hairy vetch): 131649071
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Entry
131649071 CDS
T09680
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131649071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131649071
03041 Spliceosome [BR:
vvo03041
]
131649071
03036 Chromosome and associated proteins [BR:
vvo03036
]
131649071
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131649071
Spliceosome [BR:
vvo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
131649071
Complex B
131649071
Complex C
U2 SnRNP specific factors
131649071
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
131649071
TFTC complex
131649071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
131649071
NCBI-ProteinID:
XP_058774798
LinkDB
All DBs
Position
LG2:complement(9636422..9641163)
Genome browser
AA seq
1215 aa
AA seq
DB search
MYLYNLTLQRPTGIICAINGNFSGGKGQEIVVARGKVLDLLRPDDNGRIQTVLSVEVFGA
IRSLAQFRLTGAQKDFIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGCRRIVPGQYI
AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVFSICGVDCGFENPI
FAAIELDYSEADQDSTGMAASEAQKSLTFYELDLGLNHVSRKWSDQVDNGANLLVTVPGG
ADGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPSERNVLIVSAAMHKLKNMFFFLLQ
TEYGDIFKVTLEHEGDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHALYQFKAI
GDDDDDVEASSATLMETEEGFQPVYFQPRRLKNLVRIDQVESLMSIMDMKVSNLFEEETP
QIFTLCGRGPRSSLRILRTGLAVSEMAVSTLPGTPSAVWTVKKNVIDEFDAYIVVSFLNA
TLVLSIGETVEEVSDSGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGK
RTIDKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKQEMSGDVACLDIAPVPEGRKRS
RFLAVGSYDKTIRILSLDPDDCLQTLSIQSLSSAPESLLFLEVQASIGGEDGADHPASLF
LNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYI
HQGHFLLTPLSYETLEFAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYT
PRKFVLQPKRKLLVVIESDQGAFTAEQREAARKECFEAAQAGENGTGGADQLENGGEDED
KDDPLSDEHYGYPRAESDKWASCIRVLDPRTGNTTCLLELQDNEAAFSVCTVNFHDKEYG
TLLAVGTAKGLQFTPKRSLAAGFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLA
GIGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQL
YIFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGK
LNGAPNKVEEIVQFHVGDVITCLQKASLIPGGGECILYGTVMGSIGALHAFTSRDDVDFF
SHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTP
GEILKKLEEVRNKII
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatctcactctccaacgccccaccggcatcatctgtgccatcaacggc
aacttctccggcggcaagggccaagaaatcgtcgtcgccagaggcaaagtcctcgatctc
ctccgccccgacgacaacggccgaatccaaaccgttctctccgtcgaagtcttcggcgcc
attaggtcgttggctcagttccgtctcaccggtgctcagaaggatttcatcgttgtcggt
tcggattccggtagaatcgttatcttggattacaacaaggagaagaatgtctttgataag
attcatcaagaaacgtttgggaagtccggttgccggaggattgttccaggtcagtatatc
gctgtagatcccaaaggtagagctgttatgattggtgcttgtgagaagcagaagcttgtt
tatgtgttgaatagagatactgcggctaggttaacgatttcttcgcctttagaagcgcat
aaatcgcatactcttgttttttcgatttgtggtgttgattgtggatttgagaatcctatt
ttcgctgctattgagttggattactccgaggctgatcaggattctactggtatggctgct
tcggaagcgcagaagagtttgacgttttatgagcttgatttgggtcttaaccatgtttct
agaaagtggtctgatcaggttgataatggtgctaatttgcttgttactgttcctggtggt
gctgatggtccgagtggggttcttgtttgtgctgagaattttgttatttataagaatcag
gggcatccggatgttagggctgtgattcctcggcgggctgatttaccttctgagcgtaac
gttctcattgtctctgctgctatgcataaactgaagaacatgttctttttccttttgcag
actgagtatggggatatctttaaggtaacattggaacatgagggagaccgtatctctgaa
ttgaagattaagtattttgatactattccggttacttcttctatgtgtgtgctcaagtcg
gggttcttgtttgcggcctccgagtttggaaatcatgctctgtatcagtttaaggctata
ggggatgatgatgatgatgtggaggcttcgtctgctacgttgatggaaactgaagagggt
tttcagcctgtgtatttccagcccaggagacttaaaaatcttgttagaattgaccaggtt
gagagtttgatgtctattatggatatgaaagtcagtaatctgtttgaagaggagactcct
cagatttttactctttgtgggcgcggaccacgatcttctctaaggatcttgagaacaggc
ttggctgtcagtgagatggcagtttctacgctgcctggtacacctagtgctgtttggact
gtgaagaagaatgttattgatgagtttgatgcttatattgttgtgtcgttcctcaatgcc
acacttgtgctttccattggtgagacagtcgaagaagtcagtgacagtgggtttttggac
actaccccctccctttccgtttctttgataggtgacgattctctcatgcaggtccatcca
aatggtattaggcatattagggaggatggtcgtattaatgaatggagaactcctgggaag
aggacaattgacaaagttgggtcgaatagacttcaggtggttattgctctgaatggaggg
gagcttatatattttgaagtggatgtaactggtcagttgatggaggtcgagaagcaggaa
atgtctggcgatgttgcttgtttagacattgctccagtgcctgaaggcaggaaaagatcc
cgttttcttgcagttggctcatatgacaagacaatccgaatcttatcactggatcctgat
gattgtttgcagactctaagtatacagagtctttcttcagctccagaatctcttcttttt
cttgaagttcaagcatctattggtggtgaggatggtgcagatcatcctgctagccttttc
ctgaatgctggtttgcagaatggtgtcttgtctagaactgtggtggatatggtcacaggt
ctgctttctgatacccgctcccgattcttagggttgagagccccaaaactgtttccgatt
atcgtaagaggcaagcgtgctatgctctgcctttcaagtcgcccttggcttggttatatt
caccaaggacactttctcttaacacccctttcatacgaaacccttgagtttgctgcctca
ttttcatctgaccaatgtgtggaaggcgtggttgctgttgctggtgaggcattgagaatt
tttaccattgaaagattaggagaaacatttaatgagacagttattccacttagatacaca
cccagaaaatttgtgttgcaacccaaacggaaactgttggtggtgattgagagtgatcaa
ggagcatttactgcagaacagcgtgaagctgcaaggaaagaatgttttgaggctgctcaa
gctggggaaaatgggacaggaggtgcagaccaactggagaatggtggggaggatgaggat
aaagatgaccccctctctgacgagcattatggttatccaagagctgaatcagataagtgg
gcatcctgcatcagagttcttgatccaagaactggaaataccacctgccttttggaactt
caggataatgaggctgcattcagtgtatgcacagtaaatttccatgataaagaatatgga
acccttttagctgttggcacagcaaagggactgcagtttacacccaaaaggagtttagct
gcaggatttattcatatatataggtttctagaggatgggaggtctcttgaactacttcac
aaaactcaagttgaaggcgttcctcttgcgctaagtcagtttcagggaaggttacttgca
ggaataggacctgttctcaggctgtatgatttggggaagagaagattattaagaaagtgt
gagaataaactattccccaacacaattgtctctattcaaacctaccgtgatcgaatttat
gttggtgacatccaagagtcttttcactactgcaagtatagacgggatgaaaaccaactt
tacatattcgctgatgattgtgttccgagatggcttacagcatcataccacatagatttt
gacaccatggctggtgcagacaagtttggaaatatctatttcgtgcggttgccacaggac
gtatctgatgagatagaagaagatcctactggcgggaggatcaagtgggagcaggggaag
ctgaacggagctcccaataaggtggaagaaattgtacaatttcatgttggcgatgtgatc
acatgcctgcaaaaggcctctctaataccaggtggtggagagtgtattttatatggaact
gttatgggaagtattggggcattacatgcttttacttcacgagatgatgttgatttcttt
tctcatttggagatgcatatgaggcaagataacccacctttgtgcggaagagaccacatg
gcgtatagatctgcctattttcctgttaaggatgttattgatggggacctatgtgagcaa
tacccaacattgccaatggatttgcagcgaaaaattgctgatgaattggacaggacccca
ggagaaatactgaagaaactcgaggaagtacggaataagattatttaa
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integrated database retrieval system
