Vicia villosa (hairy vetch): 131652441
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Entry
131652441 CDS
T09680
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03020
RNA polymerase
vvo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131652441
09124 Replication and repair
03420 Nucleotide excision repair
131652441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131652441
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131652441
Enzymes [BR:
vvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131652441
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131652441
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131652441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
131652441
NCBI-ProteinID:
XP_058778272
LinkDB
All DBs
Position
LG2:complement(150042349..150050961)
Genome browser
AA seq
1196 aa
AA seq
DB search
MDLDEAQEYDPEMMNEDDDNDEEEITQEDAWAVISSYFEAKGLVRQQLDSFDEFIQNTMQ
EIVDESADIEIRPESQHNPGHQSDYNETVYKISFGQIYLSKPMMTESDGGTATLFPKAAR
LRNLTYSAPLYVDVSKRVIRKGHDGEHTAEAQDFTKVFIGKVPIMLRSSYCTLFQNSEKD
LTELGECPYDQGGYFIVNGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMSESQN
RPPSTMFVRMLARASSKGGSSGQYIRATLPYVRTEIPIIIVFRALGFVADKDILEHICYD
FSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGANVGVTKEKRIKHAKDILQREMLPHV
GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGSLLGGLFRNLFKKL
TRDVRGYVQKCVDNGKDVNLQFAIKAKTITGGLKYSLATGNWGQANAAGTRAGVSQVLNR
LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI
TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVKTLRKLRR
RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDILSLQQRESPDDGG
WNDLVSKGFVEYIDTEEEETTMISMTINDLVQARLNSGEAYSDTYTHCEIHPSLILGVCA
SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH
FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED
FGRPDRASTMGMRHGSYEKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKR
DHSISLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGIIAIANLK
KTSFECKGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKAIKDQKKKGA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggatttggacgaggctcaagaatacgatcctgaaatgatgaatgaagatgacgacaac
gatgaagaagaaatcactcaagaagatgcatgggctgttatttcatcgtactttgaagcc
aagggtttggttcgtcaacagcttgattccttcgacgagttcatccagaacacaatgcag
gaaatcgttgatgaatcagctgacattgaaattcgacctgagtcgcagcataatcctggt
caccaatctgattacaacgagacggtttataagataagttttggccagatttacttgagt
aaacccatgatgacagaatctgacggaggaactgctaccttgtttcctaaggctgctagg
ttaaggaaccttacttattcagcccctttgtatgtagatgtttcaaagagggtcattagg
aaaggacacgatggtgaacacactgctgaggctcaagatttcaccaaagttttcattggc
aaggttcctataatgcttcggtctagctattgcacgttatttcagaattcggagaaggat
ttgactgagcttggagagtgtccctatgatcaaggtggatatttcattgttaacggcagt
gagaaggttctcatagctcaagagaagatgagcaccaatcatgtctacgtcttcaagaaa
aggcagcctaataagtatgcttttgtagctgaagttcgatccatgtcagagtcccagaac
agaccacctagcactatgtttgtgcgcatgctcgctcgagctagttccaaagggggttct
tcaggacaatatataagagctactcttccatatgttcgaactgaaattcctattattatt
gtgtttcgggcattgggatttgtcgctgacaaagatatacttgaacatatatgctatgat
ttctcggatactcaaatgatggagttgcttcgtccttccctcgaagaagcgtttgtgata
caaaatcaacaggtggcactagactacatagggaaaagaggagctaatgttggtgtaaca
aaggaaaaaagaataaagcatgctaaggacatccttcaaagggagatgcttccacatgtt
ggtgttggagagtattgcgagacaaaaaaagcgtactattttggatatatcattcaccgg
cttctactgtgtgcacttgggcggagggctgaagatgatagggatcattatggaaataag
aggctggacctggcaggttctttgcttggcggcctctttagaaatctattcaaaaagtta
actagagatgtcaggggttatgtacagaagtgtgttgataacgggaaggatgttaacctg
caatttgctattaaagccaaaaccatcacgggtggacttaaatactcacttgctactggt
aattgggggcaagcaaatgctgcgggtactagagctggagtgtcacaggtgctaaatcgc
ttaacttacgcatccactttatctcacttgcgaagattaaattctcccataggacgtgaa
gggaagttggccaaaccaagacagctgcataattcacaatggggaatgatgtgtcctgca
gaaacacccgaaggacaagcctgtggactggtgaagaatctggccctgatggtctacata
acagttggttctgcagcatatccaattctggagtttttagaagaatggggtacagaaaat
tttgaggaaatttctcctgcggtgattccccaagctacaaaaattttcgtaaatggttgc
tggatgggcattcatcgtgaccctgatatgttagttaaaacattgagaaagctgagacgt
cgggttgatgttaatactgaagttggggttgttagagatattcgtctcaaagaactgcgc
atatatacagattatggtcgctgcagtcgtcctttattcattgtggataaacaaaggctt
ctcataaagaagaaggacatcctttctttacagcagagggaatcccctgacgatggtgga
tggaatgatcttgtatccaagggatttgtagaatatattgacaccgaagaggaagagact
actatgatttccatgacaattaatgatcttgtacaagcaaggctcaattcaggtgaagca
tattctgatacttacactcactgtgaaatccatccatcgctgattttgggtgtatgtgct
tccatcataccatttcctgatcataatcagtccccccgtaatacgtaccagtctgcaatg
ggaaaacaagcaatgggaatatatgttaccaactatcagtttcgaatggataccctggcc
tatgtattgtactatcctcaaaagcctctagtcactacaagagccatggaacatcttcat
tttcgtcaactacctgctggaattaatgccattgtggccatttcatgttattctggttat
aatcaagaagattctgtcatcatgaaccaatcatcaatagaccgtggcttctttcggtct
ctatttttccgttcatacagagatgaagagaagaaaatgggaacccttgtcaaagaagat
tttggtcggccggatagagctagcaccatgggtatgaggcatggttcttatgaaaagttg
gatgatgatggtcttgctccacctggcacaagagtgtctggcgaggatgttatcatcgga
aaaaccactcctttatctcaagaggaggctcaaggacaagctgcccgctattcaaaacgt
gatcacagcataagtttacgtcatagtgaaaatggaattgttgatcaagttctattgaca
acaaatgctgatgggttgagattcgtgaaagtaagggtgagatctgttcgaataccacag
attggtgacaaattcagtagtagacatggtcagaaggggacagtcggtatgacttataca
caagaagacatgccctggactgtggaaggcatcacccctgatattattgtcaatccacat
gctataccttccagaatgacaattggtcagcttattgagtgtatcatgggtaaggttgca
gcacacatgggaaaagaaggggatgctactcccttcacagatgttactgtggacaatatc
agcaaagctctacacaaatgtgggtaccaaatgcgaggttttgagacaatgtacaatggt
catacagggaggcgtctcagtgcaatgattttccttggccctacctattaccaaagattg
aagcatatggtggatgacaagatccattctcgtggacgaggtcccgtgcagattcttaca
aggcaacctgctgaggggcgctcacgagatggaggtcttcgatttggagagatggagcgt
gattgcatgatagcccatggagctgctcacttcctaaaggaaagattgtttgatcaaagt
gatgcatatagggtccatgtgtgcgaacgctgtgggatcatagctattgcaaatctgaag
aagacttcttttgaatgcaagggctgcaaaaacaaaactgacattgttcaggtctacatc
ccatatgcctgcaagctactcttccaagagttaatggctatggccatagctccgagaatg
cttactaaagaggtcaaagctataaaagaccaaaagaagaaaggtgcctga
DBGET
integrated database retrieval system
