Vicia villosa (hairy vetch): 131652564
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Entry
131652564 CDS
T09680
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131652564
03036 Chromosome and associated proteins [BR:
vvo03036
]
131652564
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
131652564
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131652564
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
131652564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
ResIII
AAA_19
UvrD-helicase
AAA_22
Viral_helicase1
AAA_16
DEAD
Helicase_RecD
AAA
ATPase_2
MOV-10_Ig-like
Mov-10_helical
SLFN-g3_helicase
Flavi_DEAD
AAA_5
Motif
Other DBs
NCBI-GeneID:
131652564
NCBI-ProteinID:
XP_058778440
LinkDB
All DBs
Position
LG2:complement(154161527..154167630)
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AA seq
944 aa
AA seq
DB search
MSIVGYRSDEECSVIGEKAEIGFLDFEEERSVCSYVPDDGAPVVVSVPFAFVNGKPQSVF
LGDTAVELITINNTTDEPVDLWGVHIFASNPPDSFTLSLMEPPRDNSDSESFIESFRVED
RMLQPREVLNIWLSCKTKDMGMYSSVVYFDIGDEKIERVVFLLVEDKISKSLASNRPYSK
GRKKEKFVVDAFVPGSRPAGKANRKYVNRLPRYDVPKDIRLLLEDNQNQVPQVVEDGLTR
RSYASFFKTLIIMEEIQLEDDMRTYDMECITMRRRGNNYLSMEVPGLAERRPSLVHGDYI
FAKLASEQDQNSAPVYQGFVHRVEADEVYLKFDPEFHYYHRDEDLYNVHFTYNRINMRRL
YQAVEAAENLGTEFLFPSTSRRRCIKTTNLVPISGSLNEEQMCSIKMILGCRGAPPYVIH
GPPGTGKTRTIVEAILQLYQHYKNTRILVCAPSNSAADHILEKLLAEKDIEFRDSEVFRL
NATTRPYEDVKPEFLRFSFFDEMIFKCPPVSALKHYRIVVSTYMSASLLFAEDVSRGHFS
HIFLDEAGQASEPETMIPIAHLCRRDTVVVLAGDPLQLGPVIFSKKADDFQLGVSYMERL
FKCELYGNGDANYITKLVKNYRCHPEILHLPSKLFYSGELMACRDSTTFTMTADFLPNKD
FPVLFFGIQGCDEREGNNPSWFNRIEVSKVVETVKRLIAGGKITEEDIGIITPYRQQVLK
IRHTLENHDMPDVKVGSVEQFQGQEKDVIIVSTVRSTIKHNEFDKVHCLGFLSNHRRFNV
AITRAISLLVIIGNPHIICKDNHWSQLLWHCVDNSSYLGCALPERIERFDEDVGENSGFG
FNEDNTWPSNNGEFGQDSFQTDLPKPDTNEAGWSDGWNSHNVESGQGEWSDGWNTLPPDN
VESSHGECSNGWNTPSNNVESGQDTFPELPKPVTDEAEWSDGWK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgttggatacaggtcagacgaggaatgctccgttataggggaaaaggctgaa
attggatttctagattttgaggaagagagatctgtttgcagttacgttcctgatgacggg
gctccggtagtcgtatctgtcccgtttgcatttgtgaatgggaagcctcaatcagtattt
cttggagacactgctgtggaattaataactatcaataatactactgatgaaccagtggac
ctgtggggtgttcatatttttgcatcaaatcctccggactcttttactctttctctcatg
gagcctccacgggataattcagattcagagagctttatagaatcttttagagtggaggac
aggatgcttcagcctcgcgaggtgttaaatatatggctctcttgcaagacaaaagacatg
ggcatgtactcatctgtagtgtattttgacattggagatgagaaaattgaaagggtggtt
ttcctcctagttgaagacaagatctcaaaatctctggcttctaacagaccttattcaaaa
ggaaggaagaaagaaaaatttgttgttgacgcttttgttcccggctcacgccctgcaggg
aaggcaaatcgaaaatacgttaataggcttccaagatatgatgttcccaaggatattaga
ctcttgcttgaggacaatcagaatcaggtccctcaagtcgttgaagatggtcttacaaga
aggagttatgcgtcttttttcaaaacactaatcataatggaagagatacaattagaggat
gatatgagaacttatgacatggaatgtataactatgagaaggagaggcaataattatttg
tccatggaggtacctgggcttgctgaaagaaggccatcactggtgcacggggattatatc
tttgccaagctggcttccgaacaagaccagaactctgcacctgtttatcagggatttgtt
caccgggttgaagctgacgaggtctatttgaaatttgatcctgaatttcactattaccat
agagatgaagatctctataatgtccacttcacgtataataggatcaatatgagaaggtta
tatcaagcagttgaggcagcagaaaacttaggaactgagtttctttttccatctacatcc
agaagaaggtgcattaaaaccaccaatctggttcccatatctggttctttaaatgaggag
caaatgtgttctatcaaaatgattctgggttgcagaggtgcaccgccttatgtgattcat
gggcctccaggtacaggaaagactaggacaatagttgaagcaatcctccagctctaccaa
cattataagaatactcgtattcttgtctgtgccccctcaaacagtgcagcagaccacata
ctggagaaactccttgctgaaaaggatattgaatttcgagatagtgaagtatttaggctc
aatgctactaccaggccatatgaggatgtaaaacctgaatttcttcgcttctccttcttt
gacgagatgatatttaagtgccccccagtcagtgccctcaaacattataggattgtggta
tccacatatatgagtgcatctcttctttttgcagaagatgtttcccgcggtcacttctct
cacattttcttggatgaggctggccaagcttcagaacctgaaaccatgatccctatagcc
catctctgcagaagagacactgttgttgttctggctggagacccattgcagttaggccca
gtaatattttccaagaaagcagatgatttccaattgggggtttcttacatggaacgattg
tttaaatgtgagttatatggcaatggagatgccaattatattacaaaactggttaaaaac
taccgatgtcacccagagattctacacctcccttcaaagctgttctattctggggaattg
atggcatgtagagattccacaactttcacaatgactgcggattttctccctaataaggat
ttccctgttcttttctttggtatccaagggtgcgatgaaagagaagggaataacccttca
tggttcaaccgaatcgaagtgagcaaggttgtagaaactgttaagaggctgattgctggt
ggtaaaataactgaagaagacataggcattataacaccatataggcaacaagtattgaaa
ataagacatacgcttgaaaatcatgatatgcctgatgtcaaagttggcagtgttgagcaa
tttcaaggacaagaaaaagatgttatcattgtatcgactgttcgatcaaccatcaaacac
aatgagtttgacaaagtccactgtcttggctttttgagcaatcatagaaggtttaatgtg
gctataacccgtgctatatcattgctggttattattggaaatccccatattatatgcaag
gacaatcattggagtcaattgctgtggcactgtgtggacaattcatcctatctgggttgt
gctcttccagaaaggatagaacgttttgatgaagatgttggagagaactccggctttggc
ttcaacgaagataacacatggccctctaacaatggagaatttggtcaagattccttccag
acagatctccctaaacccgacaccaatgaagctggatggtctgatgggtggaattctcac
aatgtagaatctggtcaaggtgaatggtctgatggctggaacacattgccccctgacaat
gtagaatctagtcatggtgaatgctctaatggctggaacacaccctctaacaatgtagaa
tctggtcaagataccttcccagagctccctaagcctgtcaccgatgaagctgaatggtct
gatggttggaagtag
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