Vicia villosa (hairy vetch): 131652666
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Entry
131652666 CDS
T09680
Name
(RefSeq) tetratricopeptide repeat protein SKI3-like isoform X1
KO
K12600
superkiller protein 3
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131652666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131652666
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
131652666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_14
TPR_16
TPR_8
TPR_19
TPR_9
TPR_17
TPR_12
TPR_CcmH_CycH
ARM_TT21_C
BTAD
TPR_10
TPR_7
DB_JBP1
Motif
Other DBs
NCBI-GeneID:
131652666
NCBI-ProteinID:
XP_058778587
LinkDB
All DBs
Position
LG2:complement(157337857..157354043)
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AA seq
1177 aa
AA seq
DB search
MASQNPTDEEDLFRRLQDSPDDASLHFDIGLLLWNKQEEDAKEKAAQHFILSAKLNPKNG
ESFKYLGHYYRCVSLDAQRALKCYQRAVSIDPDDFESGEALCDLLDQEGKDSLEVAVCLE
ASEMSPRAFWAFRRLGFLLVHQKKWSEAVQSLQHAIRGYPTCADLWEALGLAYQRLGRFT
AAVKSYGRAIELDNKMVFALVESGNISLTLGQFKKGVEQFQQALEILPDCVPAQFGLALG
LLSLAKDCINIGAYQWGASLLKEASEVARESARSFTNISCIWKLHADIQLAYARCNPWIE
EVQQLESNEEAFSASINSWRKTCFLAAGCAKFSYQRALHLSPWQANIYSDIAVTSDLITS
LSKNYTQDSSARQLAEKMSIGALLLEGHNYEFWVALGCLSNHNELNQHALIRGLQLNVSL
AVAWGYLGKLYLKADEKQLARQVFDRARSIDPSLALPWASMSAESYVSKESAPDEAFESC
SRAVQIMPLAEFQIGLTKLALLSGHLASSQVFGAIQQAVQHSPHYPESHNLHGLVCEARK
DYKSAATFYRLARHAVSIGSESNQNSHIRDISINLARSLSKAGNAADALKECENLNKEGL
LDEEGWQVYAFSLWQYGEYDLALSVAGSLASNLSSMKKASVASSICFISRLVYFICGLDA
VITSIIKMPKELFQSSKVSFVLSAINALDGQNRLGLVVSSTRHFLKYQEEISRMQFLIAL
GKLVKNGSDCLDIRSGIAYLRKALHMFPNCNLMRNLLGYLLLFSEELNNDHMATRCCNMD
NPDMSDQEGLKSAYYIHGAGAVACYATGNNNPKFTFPTCSKKCSSHPRAIKSLQKYIHQK
PWNHDARYLLVLNYLQKAREQRFPQHLCRTLNRLIQAALSNELYSKTEMDYQYRHFQLLL
CASEISLQCGNHTSCIADAKKASQLALPDNYLFFAHLLLCRLYAMKDDHLNFRKEYARCL
ELKTDCHIGWICLKLMECQYKLEIDSNAIDLSFEECIKRDGNSWNMWMAVYNLVRGVNLL
QKRDLVSAEEFVAQACSLAGFESCLFLCHGAICMELVRQHNSPHFLSRAVKSLTQVHELS
LIPVPFASILLAQAEGSLGSKERWDRTLRLEWYNWSPEMRPAELYFQMHLLARQLKVGLN
SKSSTESSQSPHRWVIRAIHMNPSCMRYWRVLQKLME
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcaaaaccccacagacgaagaagatctcttccgacgcttacaagattcccca
gacgacgcctctctgcatttcgacattggtttactgttatggaataaacaagaagaagat
gctaaggaaaaagctgctcagcattttattctatcggccaaattaaaccctaaaaacggt
gaatctttcaaatatctcggccattattatcgatgtgtttctcttgatgctcagagagct
ctcaagtgttaccagcgagcagtttctatcgatcctgatgatttcgagtccggggaagct
ctgtgtgatttgcttgaccaagaaggaaaggatagtttggaggttgcagtatgccttgaa
gcttctgaaatgtcaccaagggctttttgggctttccgcagattgggtttcttgctggtt
catcaaaagaaatggtctgaagctgttcagagcctccaacatgctatacgaggctatcct
acttgtgctgatttgtgggaagctctgggacttgcttatcagcggctgggcaggtttact
gcagctgtaaagtcttatggccgtgcaatcgagttggataataagatggtctttgctttg
gttgaaagtggaaatatctcgttgacacttggtcaatttaaaaagggggttgaacaattt
caacaagctttggagattttgccagattgcgtgcctgcgcaatttggacttgctttgggg
ctgcttagtttggcaaaagattgcattaacataggagcatatcagtggggagcttcattg
ttaaaggaagcatccgaggttgccagagagagtgctcgttctttcacgaatatctcatgt
atttggaaactacatgcagatattcagcttgcatatgcaagatgtaatccttggattgag
gaggtccaacaattggaatctaatgaggaagccttcagtgcttctatcaattcatggagg
aagacctgctttttggctgcaggatgtgctaaattttcataccaacgagctttacacttg
tctccatggcaagcaaacatctacagtgacattgcagtaacttcagatcttattacctca
ttaagcaaaaattacacacaagactcaagtgcacggcagctagcagaaaaaatgtctatt
ggagccttgctacttgagggtcacaattatgagttctgggtggcattggggtgtttgtct
aatcataatgaactaaatcagcatgctttgatccgaggactgcagttaaatgtttctcta
gctgttgcttggggatatcttgggaagttgtatcttaaagcggatgaaaagcaattggca
aggcaagtatttgatcgtgcgcgaagtatcgatcccagccttgcattgccatgggcaagc
atgtcagctgagtcttatgtgagtaaggagtctgcaccagacgaggcatttgaaagctgt
tcccgagctgtgcagataatgcctttagctgaattccaaattgggctaactaagcttgct
ttgctgagtggccatcttgcatcttcacaggtttttggagctattcagcaggctgtgcag
cattcccctcactatcctgaatcccataacttacatggactggtatgtgaggctcgaaaa
gattacaagtctgctgctacattttataggttagcacgccatgcagttagcattggctca
gagagtaatcaaaactcacatatcagggatatttctatcaatttggctagatcactttcc
aaggcagggaatgccgctgatgctttgaaggaatgtgaaaatttgaacaaagaagggctg
cttgatgaagaaggttggcaagtgtatgctttctcgttatggcaatacggtgaatatgat
ttggctctctctgtagctgggagtcttgcttcaaatctttcttctatgaaaaaagcatct
gtggcgtcatccatttgttttatcagtagattagtgtacttcatatgtggacttgatgca
gtcatcactagcattatcaagatgccaaaagagctatttcagagttcaaaagttagtttt
gttctgtcagctatcaatgctcttgatggacaaaaccgtcttggattggttgtctcaagt
acccggcattttctcaaatatcaagaagaaatttctaggatgcaatttttaatagcactt
gggaaattggtgaaaaatggatctgattgccttgacattagaagtggaattgcctacctc
aggaaagcactgcacatgtttcctaactgtaatttgatgaggaatcttctgggctatctc
ttgctatttagtgaagagctaaacaatgatcatatggcaactaggtgttgtaatatggac
aatcctgatatgtctgatcaagaaggtttaaaatcagcctattatattcacggcgctgga
gcagttgcttgctatgccaccggcaacaacaatccaaagtttacttttccaacttgttca
aagaagtgttccagtcatccacgagctatcaaatccctgcagaaatacattcatcagaaa
ccatggaatcatgatgcccgctacttgcttgttcttaactatcttcagaaggcacgtgaa
caaagatttcctcaacatctctgtcgtacactaaatcgtctaattcaagctgccctttca
aatgaattgtatagcaaaacagaaatggattatcaatataggcacttccaacttctactt
tgtgcttctgagatcagtttacaatgtgggaatcacacgagctgtattgctgatgctaaa
aaggcttctcaacttgcgcttcctgataattatttattctttgcacatctactattgtgc
cgtttgtatgccatgaaagatgatcatctaaattttcggaaagagtatgcaaggtgtttg
gagctcaagacagattgtcatattggttggatctgtctcaaacttatggaatgccaatac
aaactggagatcgattcaaatgccatagacttgagcttcgaagaatgcattaaaagggat
ggaaattcatggaatatgtggatggctgtatataacttagtgagaggagtgaatttgttg
caaaaaagggatttagtctcagccgaagagtttgtggcacaggcttgttcattggcgggt
tttgaaagctgcctttttctatgtcatggtgccatctgtatggagcttgtcaggcagcat
aatagtcctcacttcttatcacgggccgttaagagccttacccaagttcatgagctttcc
ctgattcccgtgccttttgcctcaatattattagcgcaagcagaaggaagccttggttct
aaggagagatgggacagaaccctccgtcttgaatggtataattggtcaccagaaatgagg
cctgcagagctctactttcaaatgcatttgcttgcaagacagttgaaagttggtctgaac
tctaaatcaagcacggagtcctctcaaagtcctcacagatgggttattcgagcaatacac
atgaacccttcttgcatgcgatattggagggttttacagaagcttatggaataa
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integrated database retrieval system
