Vicia villosa (hairy vetch): 131652716
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Entry
131652716 CDS
T09680
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvo01009
]
131652716
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131652716
03041 Spliceosome [BR:
vvo03041
]
131652716
Protein phosphatases and associated proteins [BR:
vvo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131652716
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131652716
Spliceosome [BR:
vvo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131652716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
PHM7_cyt
RRM_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
131652716
NCBI-ProteinID:
XP_058778643
LinkDB
All DBs
Position
LG2:158891875..158899177
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AA seq
919 aa
AA seq
DB search
MELKASSPKPESVAPSDCASDPEEKEVSDDDDDDRNHKHRRKEGHSQSLERDVFDPAINR
PFRKRNKNFGNRHPFRDNESMAFETLKSYSDATTDKDFYSKFERRRPGMTSIPRTPFDMN
QRLRPNQSFAGDPGAGRGRGRESGFWNHRESRFSSIDVASQMVQQGSFPPALYTGRGLPN
ISNAQNASWNTFGLIPAVPNGGLDMLHPMGLQGALRPPINSSLNANIPRQRCRDFEERGF
CLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLSSAHLIGAPAGAGSLHSVNASTASMNS
KCKPGIISKSAVNDVGLPMDGEYPGPGCTSGADLYDPDQPLWNDRGLESSNALLNMQSSK
IVDDAEPMSCDAPNSVCPVEATRTSVSFQGASASVWGRIGSSKSRVGTKEKSNPTMSSFH
FPDNQSKEDTDELIGSHSASSQGNQIIADDAIPRALEASLKAQADMRSIRRPSQKALRTL
FVNGIPHKINRRESLLAHFQKFGEVTDIHIPINSERAFVQFSKREEAEAALKAPDAVMGN
RFIKMWWANRDCVRNDNSTASGNGATVTPRGQPPTFFPSHPVATDRRTDASRTMFDGSSP
LDLSKPVIADAPKVAPPSQRKLESLEHLREQMRKKQEILDQKRNEFKRRLNKFAKQATGP
KGEVVTEQSAKRLKTSMASDVVKLASPQSSDADIGMSSPHAETTVDKNKQLVKTASQSPK
ANTPMRLQEPTGLRQSIQPSVPVNRYKLDNRPTAFRIIPPLPVGLANVAALKEHFLPYGE
LSTVELEDVEVNDSIEQEAHLNFTTRGAAEQAFIKGKCWKDHNLKFTWLAPTNSGNGNAT
VSRERSLSAPPREPLDTEGQSEEKLGNSVNHESIVSDGEHKYSETKSPSGLTKKEQDEDL
QCTTSRVSSAEQSPKDNVC
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaagcttcatctccaaaaccagagtctgtcgcgccatcggattgcgccagt
gatcccgaagagaaggaagtgagcgatgacgatgacgatgataggaatcataagcatcgg
aggaaggaaggtcattctcagtcattggagagagatgttttcgatcctgcaattaacaga
ccattcagaaagcgtaacaaaaattttgggaaccgtcatccatttagagataatgaatct
atggcctttgaaacactgaaatcttacagcgatgccaccacagataaagatttttattcc
aagttcgaaagaaggcgccctgggatgacttcaattcctcgaacaccttttgatatgaat
caaaggttacgaccaaaccaatcatttgctggagatcctggcgctggtaggggaagaggc
agggaatctggtttttggaatcatcgtgaatctaggttcagctcaattgatgttgcttct
caaatggttcagcagggatcctttcctccagccctttatactggacgtgggttaccaaat
atatcaaatgcacaaaatgcatcttggaatacatttggtttaattccagccgtacccaac
ggtggcttagacatgcttcatccaatgggtttacaaggagcgctcagaccacctattaat
tcatctttaaatgcgaatattcctcgtcaacgatgcagagattttgaggaacgtggattt
tgcctgaggggggacatgtgccctatggaacatggtgttaatcgaattgtcattgaagat
gttcagagtctttcacagttcaaccttcctgtttcgctttcaagtgcacacctaattgga
gcacctgctggagctggatcactacattcagtaaatgcttcaaccgcttcaatgaacagc
aaatgtaaacctggaattatttccaagtccgctgtcaatgatgttggtttgccgatggat
ggtgaatatcctggtccaggttgcacaagtggagctgatctttatgatccagatcaacca
ctgtggaatgataggggtctggaatcttcaaatgcactcctaaatatgcagtcatcaaag
attgttgatgatgccgagcctatgtcttgtgatgctccaaatagtgtttgtccagtcgaa
gctaccagaacctcagtcagttttcagggtgccagtgcatctgtctggggcagaattggt
agttcaaaaagtagagttggcacgaaagaaaaatctaaccctacaatgagctctttccat
tttcccgataatcaatcaaaggaagatactgatgaattaataggttctcacagcgcctcc
agtcaaggtaaccaaatcatagcagatgatgccatcccaagagccttggaagcatctttg
aaggcacaggctgatatgcgtagcatacgtagaccatcacagaaggcattgcgtactcta
tttgtaaatgggatacctcataagattaacaggagggaatctcttcttgctcattttcag
aagtttggggaagttaccgacattcatattccaataaacagtgaacgagcttttgtccaa
ttctccaagagggaagaggctgaagctgctctgaaggcacctgatgctgtaatgggcaat
cgtttcatcaagatgtggtgggccaatcgtgactgtgttcgtaatgataattctactgca
agtgggaatggtgcaactgtaactccccgcgggcaaccaccaactttctttccatctcat
ccagtggccactgataggagaactgatgcttcaaggactatgtttgatggatcatcaccg
ttggatttatcaaagccagtcattgcagatgcacccaaggttgcgcctccttcgcagagg
aagcttgaaagcttagagcatctaagggaacaaatgcgcaagaagcaggaaattctggac
caaaagcgtaacgagttcaagcgccggttgaacaaatttgcgaaacaagctacaggaccc
aagggtgaagttgttaccgagcaatctgccaagagacttaaaacaagcatggcgtctgat
gtagtcaaactggcttctcctcaatcgtctgatgctgatattggtatgtcatctccacat
gcagagacaacagtggataagaataaacagttggtcaagactgcttctcaaagtcctaaa
gcaaatacaccaatgagactacaagaacctacaggcttgaggcagtcaattcaaccatca
gtgcctgtcaatagatacaaattggataaccgtcccactgcatttagaatcatcccacct
ttgccagttggtctagcaaatgttgctgcgttgaaggaacacttcttaccatatggtgaa
ctttccactgtagagctagaagatgtggaagtcaatgacagtattgagcaagaggcacat
ctaaattttactactcgtggagcagctgagcaggcctttataaaaggtaaatgctggaaa
gatcataaccttaaattcacgtggttggcacctaccaattctggcaatggcaatgccact
gttagtagagaacgttctctatctgctcctcccagggagcctttggatacagaaggtcaa
tctgaagaaaagttgggaaactctgtaaaccatgaatcaattgtgtctgacggtgagcat
aaatattctgaaactaaaagtccttcggggcttacgaaaaaggaacaagatgaagatctc
cagtgtaccaccagtcgagtgtcttcggccgaacagtcaccaaaggacaatgtctgttga
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