Vicia villosa (hairy vetch): 131652720
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Entry
131652720 CDS
T09680
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131652720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131652720
03009 Ribosome biogenesis [BR:
vvo03009
]
131652720
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131652720
Spliceosome [BR:
vvo03041
]
Complex A
U1 snRNP components
U1 related factors
131652720
Complex B
131652720
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
Helicases
131652720
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
131652720
NCBI-ProteinID:
XP_058778648
LinkDB
All DBs
Position
LG2:complement(159248247..159253800)
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AA seq
757 aa
AA seq
DB search
MAATATAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPLSSAASPKPSS
VPSSSVQVQQSSQGRGRSPDFSDRYDRNGNGVSDENGSRSHQSSKGGTFSSHNDVANGTH
VAGNVSSIKGHIASDTGPALTPEAYRRRHEITVTGDNVPPPVTSFATSGFPSEILKEVQN
AGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTILV
LSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLRDIDRGADIVVATPGRLNDIL
EMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAAD
LLVNPVQVNIGNVDELVANKSITQHIEVLAHMEKQRRLESILRSQDQGSKIIIFCSTKKM
CDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVV
NYDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIKILEGANQKVPPELREL
SSRGGGGFGRSRRYSSGGRGDSGFGAKSYDSGYGGRGNDSGYGGRGSDSSYGGRGGYGSS
AAFGRGGGRGFDYDSQRNERDRSPDRGSSWSDRFKTRERSRSPVKATASAASQYTPGVSF
HQAMMERNGGGSDRNKSFNRERSRSHSPYRQDKGKSSRSPPGGGRTNSSPQKGWGGSSGV
GRNGGSHPYNGELEEGMIPEEEGMIGHDESSIYRSAN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacagcaactgccgtgggtcctaggtatgcgccagctgatcccacccttcct
aaaccatggaagggccttgtggatggcaagacagggtatctttacttttggaatcctgag
acaaatgtcacccagtatgaaaggcctttgagctcagctgcctcaccaaagccttcttca
gtgcctagctcttctgtccaggttcaacaatcgtctcaagggcgtggtcgcagtcctgat
ttcagtgatagatatgataggaatggaaatggcgtgtcagatgaaaatggatctcggagc
catcagagttccaagggtggcacttttagttctcataatgatgttgcaaatggaacacat
gttgctggaaatgttagttctatcaaaggtcacatagcatcagatacaggacctgcatta
actccagaggcttatagacgtcgtcacgagatcactgttactggagataatgtgcctcca
cctgttacatcatttgcgacttctggctttccatctgagattctcaaagaggtacaaaat
gctgggttctcagccccaactccaattcaggcacaatcgtggcccattgctcttcaaagt
aaagatatagttgccattgctaaaacaggttcagggaaaaccttggggtatttacttcca
gcatttattcaccttaagcgcactaataataatgccaaaatggggcccactatattggta
ctttcaccaacaagggagttggcaacacaaattcaagacgaagctgtaaagttcagtaaa
acatcaagaatcgcctgcacttgtttgtatggaggagcaccaaagggtcctcaattgaga
gatattgaccgtggagcagatattgtggtagccacacctggtcgcttgaatgatattctt
gagatgaggagaatcagtctacatcaggtctcttacctagtcctagatgaggcagacagg
atgctggacatgggttttgaacctcaaattaggaagattgtgaacggggtgcccgctcgc
aggcaaactcttatgtttacagcaacttggcctaaagaggttagaagaattgcagctgac
ctgcttgtcaatcctgtccaggtgaacattggcaacgtagatgagcttgtagctaacaag
tccatcactcagcatattgaagttttggcacatatggagaaacagcgacgactggaaagt
attttgcgttcacaggatcaaggatcaaagataattattttttgctctaccaagaaaatg
tgtgatcaacttgctcgtaatcttacacgccagtttggagctgctgctatacatggggat
aaatcccaggctgatagggatcatgtgttgaatcagtttcgaagtggaaggactcctgta
cttgtagccacagatgttgctgctcgtggattggacgtcaaagacattagagtggttgtc
aactatgacttccctacaggagtggaggattatgttcataggatcggaagaactgggagg
gctggagccaccggtatagcttacactttctttggggaccaggatgctaaacatgcttca
gatctcatcaaaatcttagagggtgcaaaccagaaagtccctccagaacttcgtgaattg
tcatccaggggtggcggtgggtttggcagatccagacgatatagttctggtggtcgtggc
gattctggatttggcgcgaagagttatgactctgggtatggtggaaggggtaatgattca
ggatatggtggaaggggtagtgattcaagttatggaggaagaggtggatacgggtcttct
gctgcttttggcagaggtggaggccgaggatttgactatgactcacagaggaatgaacga
gaccgaagccccgataggggatctagctggagtgatcgcttcaaaactcgggagcgcagc
cgcagtcccgtcaaagctacagcatctgcagcatctcaatataccccgggagtcagcttt
catcaagcaatgatggaacgcaatggaggaggcagtgatcgcaacaagagctttaaccgg
gagagaagccgcagtcatagtccttatagacaggacaagggaaaaagttcacgatcccct
cctggcggtggtcggaccaacagtagtcctcagaaagggtggggaggatcttcaggtgtt
ggaagaaatggtggttctcatccttacaatggagaattggaggaagggatgattcctgaa
gaagaaggaatgataggtcatgatgaatcttctatatatcgaagtgcaaattag
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