Vicia villosa (hairy vetch): 131654064
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Entry
131654064 CDS
T09680
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131654064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131654064
Enzymes [BR:
vvo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
131654064
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
131654064
DNA repair and recombination proteins [BR:
vvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
131654064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
TFIIF_alpha
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
131654064
NCBI-ProteinID:
XP_058780457
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All DBs
Position
LG2:complement(225121456..225132572)
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AA seq
391 aa
AA seq
DB search
MPELPEVEAARKAMEDNCIGKKITKCIVADDSKVIDGVSHSEFEASVIGKTIVAARRKGK
NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQLDDGLEI
SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMKLDEFTERLHKKKTEIKALLLDQSY
ISGIGNWVADEVLYQARIHPQQTASSLSGENCSTLYECIKEVIEKAVEVGADSSQYPTNW
IFHFREKKPGKAFVDGKEIDFITAGGRTTAYVPELQKLSGPQKLKETGETKGKTSKKAKV
DDDNNDDIENPTKKEDQNSGKKGAKAGAKGRKPSKRKKTDESDEDNDDDAGTDNDDDSDQ
VEKKKPAPAKKQSKKSVQSNQNSRSTRGKAK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctaccggaggtagaggcggcgaggaaggcgatggaagataactgtatcggg
aagaagataaccaagtgcatcgttgccgacgattcaaaagtcatcgacggtgtttctcac
tccgaatttgaagcttccgtcatcgggaaaaccattgtcgcagctcgccggaaggggaag
aacatgtggcttcagctcgattctccaccttttccttccttccaattcggtatggctggt
gcaatatacatcaagggagttgcagtaacaaagtacaaaaggtctgctgtaaatgatgag
gatgaatggccttctaaatattcaaagttttttattcagctagatgatggtttggagata
tccttcactgacaaaaggagatttgctaaagttcgcctgctcaaagatccgacatcagtg
cctcccatatccgagcttggtcctgatgcactctttgaacccatgaaacttgacgaattc
actgagcgtttgcacaagaagaaaactgaaatcaaggctttattactagatcaaagctat
atttcaggtattggaaattgggttgcagatgaagtgctttaccaagcaaggattcatcca
cagcagacagcttccagcttgtcgggagaaaactgctcaactttgtatgaatgtattaaa
gaggttattgaaaaagcggttgaagttggagctgatagtagtcaatatcccactaattgg
atatttcattttcgtgaaaagaagcccggcaaagcttttgttgatgggaaagaaattgac
ttcatcacggcaggtggcaggacaaccgcgtacgtgccagagctgcaaaagctaagtgga
ccgcaaaagttaaaagaaaccggtgaaactaaagggaaaacctcaaagaaagcaaaagta
gatgatgataacaacgatgacatagaaaatcctacaaagaaggaagaccagaattcagga
aagaagggggctaaagctggagctaaaggtagaaaaccttctaaaagaaaaaagaccgat
gaaagtgacgaagacaatgatgatgatgctggtaccgataatgatgatgacagtgatcaa
gttgaaaagaagaaaccagctccggctaagaagcaatcaaagaaaagtgttcaaagcaat
caaaacagtaggagtactaggggtaaagctaagtag
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