Vicia villosa (hairy vetch): 131654199
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Entry
131654199 CDS
T09680
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131654199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131654199
03009 Ribosome biogenesis [BR:
vvo03009
]
131654199
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131654199
Spliceosome [BR:
vvo03041
]
Complex A
U1 snRNP components
U1 related factors
131654199
Complex B
131654199
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
Helicases
131654199
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
131654199
NCBI-ProteinID:
XP_058780605
LinkDB
All DBs
Position
LG2:complement(230383359..230389254)
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AA seq
502 aa
AA seq
DB search
MSRYDSRSSDPTSYRDRRSDSGLGGGGGSAAAPSSRRDYDDGGSGSPKKINLDGLPHFEK
NFYNESPSVRAMTEAEVIEYRRRREITVEGKDVPKPVKSFSDAAFPEYVLEEVKKAGFVE
PTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPT
RELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNH
TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYN
PYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGA
PPPPSGGFRDRGKSFGSGRPWS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgatagccgttcctccgaccccacttcctaccgcgaccgaagaagtgac
tcgggtttaggtggtggaggaggttctgctgctgcgccttcgagtagaagagactacgat
gacggtgggtctggttctcctaagaagattaatttggatgggttacctcattttgagaaa
aatttctacaatgagtcgccgtctgtgagggcaatgactgaggctgaagttattgagtat
cggcggagacgcgaaattactgttgaagggaaagatgttcctaaacctgttaaatccttt
tctgatgctgcttttcctgaatatgtactggaagaagttaaaaaagctggatttgttgaa
cctacacctattcagtcccaaggttggccaatggctttgaagggacgtgatctaatagga
attgcagagacaggatcagggaagacacttgcttatttgttgccggcaatagtgcatgta
aatgctcagccaattctagatcctggggatggacctattgtgttagttttggctcctact
cgtgaacttgccgttcaaatacaacaagaagctactaaatttggtgcatcatctaggatt
aagagcacatgcatttacggtggggttcctaaggggcctcaagtgcgcgatctacagaaa
ggtgttgaaattataattgccactccgggaaggttaattgatatgcttgagtcaaatcat
actaacttgcgaagggtcacatacctggtattggatgaagctgataggatgctggacatg
gggtttgatccccagatacggaaaattgtctctcagattcgcccagaccgtcaaactttg
tactggagtgctacttggccaaaggaggttgaacaattagcaaggcagttcctttacaat
ccatacaaagtaattataggttctgaagatttaaaagcgaaccatgctataaagcaatat
gttgacattgttcccgaaaagcaaaaatacgataaattggtgaagttgttggaggacatc
atggatggaagtcgaatattgatattcatggatacaaaaaaaggatgtgatcagattact
aggcagctccgtatggatggttggccagcactttcaattcatggagacaaaagtcaagca
gaaagagattgggtgctttcagagtttaaatctggaaagagtcctataatgactgcaaca
gatgttgcagctcgtggtttagatgtgaaggatgtgaaatacgtcataaattatgacttc
ccgggatcactagaagattatgttcatcgaattggaaggactgggagagctggtgcaaaa
ggcactgcatacacattctttacagctgctaatgccagatttgcaaaggaacttataagc
atacttgaggaagctggacagagagtgagctctgagctggcagcaatggggcgtggtgca
cctcctccgccttcaggaggcttccgagaccgagggaagagttttggcagcggtcgccca
tggagctga
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