KEGG   Vicia villosa (hairy vetch): 131656942
Entry
131656942         CDS       T09680                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03082  ATP-dependent chromatin remodeling
vvo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131656942
   03083 Polycomb repressive complex
    131656942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvo03036]
    131656942
Chromosome and associated proteins [BR:vvo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     131656942
  Histone modification proteins
   HAT complexes
    HATB complex
     131656942
   HDAC complexes
    Sin3A-HDAC complex
     131656942
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     131656942
    PRC2.2
     131656942
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     131656942
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131656942
  Chromatin remodeling factors
   NuRD complex
    131656942
   NuRF complex
    131656942
   NuRF complex (fruit fly)
    131656942
SSDB
Motif
Pfam: Beta-prop_RIG_2nd WD40_CDC20-Fz WD40 Beta-prop_CAF1B_HIR1 CAF1C_H4-bd WD40_WDHD1_1st WD40_Prp19 WDR55 Beta-prop_EIPR1 Beta-prop_EML EIF3I Beta-prop_IFT140_1st Beta-prop_WDR11_1st WIV_dom
Other DBs
NCBI-GeneID: 131656942
NCBI-ProteinID: XP_058782473
LinkDB
Position
LG1:complement(147671423..147672927)
AA seq 308 aa
MTQKFEWLSNTFQWFPTCNESEDKNYSVQKVIFGNHDDEYDRNYLMIAEVQIAHKYSDSD
YSSNNDCSNNNDVNDGIIFNIIKEINHDGDVNIVRYMPNKDSIIASKTNGPEVYIFDTDK
QTSKASDDRARPELRLLSHKTNGYGLSWSKFNSGHLLSGDYDGNICIWDVNATSNNLTLD
PLRIFKVNEGDIEDIAWNSKNANLFGSVGKKNLHLWDVRAPIMNNPVNWNPNNETMFASG
CHLRRVFVWDISKIDDKKNNMDIDDGPALLFVHHEHLGEISDLSWNPCEDMMIASVDVGN
SIHLWKMY
NT seq 927 nt   +upstreamnt  +downstreamnt
atgacacaaaagtttgagtggctctccaacacattccaatggtttccgacttgcaacgaa
tcggaagataagaactactcagtacagaaggtcattttcggaaaccatgatgacgaatac
gaccgcaattacctaatgatagccgaggtccaaattgctcataagtattcggattctgac
tactcaagcaacaatgattgttccaacaacaatgatgtaaacgatggcattatttttaat
attatcaaggagatcaatcacgatggcgatgttaacattgttcgttacatgcctaataaa
gattcaattattgcaagtaaaacaaatggtcccgaggtttatatatttgatactgacaaa
caaacttctaaggcttctgatgatcgtgctcgccctgaactaaggttacttagtcataaa
actaatggttatggcttgtcttggagcaaattcaatagtggtcatttgcttagtggtgat
tatgatggtaatatttgtatttgggatgttaatgccacttccaacaatcttaccctcgat
cccttgcgaattttcaaggttaatgaaggtgatatagaagacatagcatggaattcaaag
aatgcaaatttatttggatctgttggcaaaaaaaacttgcacttatgggatgttagagct
ccaataatgaataatccagttaattggaatccaaataatgagacaatgtttgcttctgga
tgtcatcttaggagagtgtttgtttgggatattagtaagattgatgataagaaaaataat
atggatattgatgatggtcctgcattgctttttgttcatcatgaacatttaggtgaaata
agtgacctttcttggaatccttgtgaagatatgatgattgctagcgtggatgttggaaat
tcgattcacttatggaagatgtattaa

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