Vicia villosa (hairy vetch): 131658821
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Entry
131658821 CDS
T09680
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03022
Basal transcription factors
vvo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131658821
09124 Replication and repair
03420 Nucleotide excision repair
131658821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131658821
03036 Chromosome and associated proteins [BR:
vvo03036
]
131658821
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131658821
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131658821
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131658821
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131658821
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131658821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
DUF7413
Motif
Other DBs
NCBI-GeneID:
131658821
NCBI-ProteinID:
XP_058784056
LinkDB
All DBs
Position
LG3:113040677..113042408
Genome browser
AA seq
446 aa
AA seq
DB search
MEFSLDGLKIYFPYSSVYQEQLNFMKEIKLALDTGDHTIVSTYKDKCKGSTVAMLSLLVS
YAGSKFGESKQILYCTKDSERSDKIMKTLKFVYDHRCTVLGGDSPSILAVEFSSRKEFCI
NSDVIEESKQYDEDAEKDEDKLVAGCREHTASWIREVDIEDVCSFFDKAEGVVLSPGIYD
IKDLVDTGNKHGWCPYFATKQALQTANVIVFGYENVLVPKIAGVVCKELKMNSNSIVIFD
NADDVAKLCREALSVVISLDTVIHAERNIEKLTKELESANKDRLRMENKRLMNGVKHEIP
LTDIWLANPALPEHLIGQPMPNEICVAENFLQHLNHLFFDERLSSLLRTLKIDNTDTFLS
IQKVCHFATLWGTYLDYYNEFRVETGPCSSIHDDYPSNENIVKLACIDNSLVFKSVLGKF
SSVCITLKEGPANSFITKMKLEALFK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagttttctttagatggtttgaaaatctactttccatactctagtgtctatcaagaa
caacttaatttcatgaaagaaattaagttggcactggacactggtgatcacactattgtt
tcaacttacaaagataaatgcaaaggttccacggttgctatgctatctctgctagtcagt
tacgctggttctaagtttggtgaatccaaacagatactctattgcactaaagattctgaa
aggagtgacaagattatgaagacgctcaaattcgtctacgatcatcggtgcactgtatta
ggtggtgacagtccaagcatccttgcggtcgagttttcctcccgcaaggaattctgtatt
aattctgatgtgattgaagaatctaaacaatatgacgaggatgctgaaaaagacgaggac
aagttggtagcaggatgtagggaacatactgcaagctggattagagaagtggatatagag
gatgtttgctcattttttgataaagctgaaggtgttgtgttgtctcctggtatttacgac
attaaggatcttgttgatactggaaataaacatggctggtgtccttattttgctacaaag
caagcattacaaactgccaatgttattgtatttggatatgaaaatgttctggttcctaag
atagctggagttgtatgtaaggagctgaagatgaattccaattcaattgtaattttcgac
aatgctgatgatgttgctaagctgtgcagggaggcactatcggtagtcatatctctggat
acagttatacacgcagagcgaaatatagaaaaattaactaaggagttggagagtgccaac
aaagaccggctacgtatggaaaacaaaaggctgatgaatggtgtgaaacatgaaatccct
ctcactgatatctggctagctaatccagctttaccagagcacttaataggacaaccgatg
cccaacgaaatctgtgtcgctgaaaacttcctccagcatttaaaccatctgttctttgat
gaacgacttagctcgcttctcagaactttaaaaattgacaacactgatacattcctctcc
atacaaaaagtatgccattttgccacactatggggaacctatttggactactataatgaa
tttagagttgaaactggaccttgctcttccattcatgatgattatccatctaatgaaaat
attgtgaagctagcttgcatagacaattccctcgtctttaaatcggttttaggcaaattt
agctctgtgtgtatcaccctcaaagaaggacctgcaaattccttcattaccaagatgaaa
cttgaggctctctttaagtag
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