Vicia villosa (hairy vetch): 131660666
Help
Entry
131660666 CDS
T09680
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131660666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131660666
03036 Chromosome and associated proteins [BR:
vvo03036
]
131660666
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131660666
Coactivators
SAGA/TFTC/STAGA complex
131660666
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131660666
STAGA complex
131660666
TFTC complex
131660666
SAGA complex
131660666
SLIK complex
131660666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Ge1_WD40
LisH
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD40_like
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_DCAF12
PALB2_WD40
Cytochrom_D1
WD_LRWD1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
131660666
NCBI-ProteinID:
XP_058785939
LinkDB
All DBs
Position
LG3:complement(23942411..23950129)
Genome browser
AA seq
669 aa
AA seq
DB search
MDDEEILGYVTAYLKKKGFKQTEKVFQEEFQQNKSSSSSSTLLEPDIANHLLAFSQLENG
PARYHNGYSRLRTWTYSSLDLYRHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNTFRED
HELMHLRDIQKLEGVLSPTHLKEMEFAHSLRQSKFNIKICEYSYELLLQHLHSTQSTTIL
GIVNEHINFQVTSGQPSLISDDPEAVTLIGSSQEAANQTNQKEIHWGLLEDSLEERLEKA
GALLSDSEKGDGETKEGENDESKKRSIEVGKQGASVKKIKKDKGGSATGKTAKPEVNTVS
AAPRVKPELPLPTIPTEVEHSILEDLRNRVQLSNVALPSVSFYTFINTHNGLSCSSISHD
GSLVAGGFSDSSLKVWDMAKLGQQPSNSLSQGDNDTAQNEQVLGKSGGKRQYTLFQGHSG
PVYAASFCPVGDFLLSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASCS
HDRTARVWSMDRIHPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRV
FVGHRGMVLSLSMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLAFSSEGS
ILASGSADCTVKLWDVNTSTKVSRIEEKNGNTNRLRSLKTLPTKSTPVNALRFSRRNLLF
AAGALVKNV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaagaaattctcggatacgttacagcatacctgaagaagaaagggttcaaa
caaacggaaaaggttttccaagaagagtttcaacagaacaaaagcagttcctcatcgagt
actcttctcgaacctgacattgccaatcacctccttgcattctctcagttggagaatggt
cctgctaggtatcataatgggtatagtaggttaagaacatggacttactcttctttagat
ttatacaggcatgagttgcttcgtgtgctttatccagtgtttattcattgctttatggac
ctcgttgctaaagggcatattcaagaagctaggaattttttcaatactttccgagaagac
catgaattgatgcacttacgtgacattcaaaagttggaaggagttctttctccaactcat
ttgaaggaaatggaatttgctcattcactaaggcagagcaaattcaacataaagatatgt
gagtattcctatgagcttctgctgcaacatctacacagtactcaatccaccactatactg
ggtatagtcaacgagcatattaacttccaagttacctccggacaacctagcttgatttcc
gatgatccagaagctgttacccttattggaagcagccaggaagcagcgaaccagacaaac
cagaaagaaatacactgggggttgcttgaagactcgctagaagaacggttggaaaaggct
ggggcattgctttcagactctgaaaagggtgatggggagacaaaagaaggggaaaatgat
gagagtaagaaaagatcaattgaagttggaaaacaaggtgcttcagtcaaaaagataaaa
aaggacaagggtggaagtgcaaccgggaaaactgcaaagcccgaagttaacactgtatca
gcagctcctcgagttaaaccagaactccccttgcctacaattccaacagaggtagaacac
tccatccttgaagatttaaggaaccgtgtacaacttagtaatgttgcgctgccatcagtt
agcttttatactttcatcaatacacataatggtttaagctgttcatcaatatctcatgat
gggtcattggttgctggaggattttctgattcttcgctgaaggtttgggatatggccaaa
cttggacaacaaccctctaattctctttcacaaggtgacaatgatacggcacaaaatgaa
caagttcttgggaaaagtggtgggaaaagacagtatacactgtttcaaggtcactcggga
ccggtttatgcagcctctttttgtcctgttggcgacttcttactttcatcctcagcagac
tcaacagttcgtctatggagcacaaagcttaatgccaatcttgtttgttacaagggccac
aattatcctgtctgggatgttcagtttagtcctatggggcattattttgctagctgttca
catgacagaactgctagggtttggtccatggacaggatacaccctttacgaataatggcg
ggacacttgtctgatgttgactgtgtccaatggcatgccaactgcaactacatcgccact
ggttccagcgacaaaacagttcgactatgggatgtgcagagtggagagtgcgttcgggtt
tttgttggtcacaggggaatggtcttgtctttgtcaatgtctcctgatgggcgctatatg
gcttctggtgatgaagatggcacaatcatgatgtgggacctctcaagcggtcgctgtgtc
acgcctttggttggtcacacatcatgcgtctggtcacttgctttcagttctgaaggttct
attctagcatctggatctgctgattgcactgtaaaattatgggatgtaaatacgagcact
aaggtttcaagaattgaagaaaaaaatgggaatactaacagactcagatcgctcaagacc
ctaccaaccaaatctaccccggttaatgcattgcggttttctcgaaggaatcttcttttt
gcagctggagctcttgtaaaaaatgtttaa
DBGET
integrated database retrieval system
