Vicia villosa (hairy vetch): 131660856
Help
Entry
131660856 CDS
T09680
Name
(RefSeq) THO complex subunit 5A-like
KO
K13174
THO complex subunit 5
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131660856
09122 Translation
03013 Nucleocytoplasmic transport
131660856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131660856
03041 Spliceosome [BR:
vvo03041
]
131660856
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131660856
Spliceosome [BR:
vvo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131660856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
131660856
NCBI-ProteinID:
XP_058786190
LinkDB
All DBs
Position
LG3:31219904..31225334
Genome browser
AA seq
810 aa
AA seq
DB search
MEDGEIEEGSIAVEEEQHQQPFPHSSEDPISEESPYEILHNSKSSIETIISDILSIKKDA
KPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMETERAKAPVDFTTLQLHNLVYEKS
HYLKAIKACKDFKSKYPDIELVPEEEFLRDAPKDIKDSVLSKDSAHNLMLKRLNFELHQR
KELCKHHAKLEQQKKILLDTIATRKKFLTSLPSHLKSLKKASLPVQNQLGIMHTKKLKQH
HSAELLPPALYVIYSQLLAHKEAFVEPIDLEIVGSLKDAQAFARKQAHKETGISTVTESS
KLEDDVPDDEDDGQRRRKRPRRVPVKESSDQGGIFQSHPLKIIIHVYEDETSDPKPAKLI
TLSFEYMVKLNIVCVGIEGSNDGPDNDILCNLFPNDTGLELPHQSAKLFVQDAITFNAQR
TSRPYKWAQHLAGIDFLPEVSPLLPTDNSEVARSGDVISGLSLYRQQNRVQTVLQKIRSR
RKAQLALLKQLESLTKLELPLLSCKSVPWALHTPLCKLDGWSPIKALPVPRETSPLATID
KEEHVQESMDVDVIENSGATKEDLDGMTEDGELPTLLPNMTKFDHSKQASLISKSIIPSL
SKVRSKSFKKVDDSTDFLLDTDSDFDEPAQIGSELEDTVSDYCAGKSLSWIDSSVKEFLL
VLSRKTNTDDRNVNLEAKIKISMEYPLRPPLFALSLCRIPVGENHFKNDGLEWYNELRAM
EAEVNLHMVKKLPVIEHNYVLAHQVSCLAMLFDYYLDEGSSSERINCTTLVDVGLCKPVS
GGFLGRSFRGRDHRKMISWKDMKFTSTRPQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtgagatagaagagggttcaatcgccgtcgaagaagaacaacaccaacaa
ccgtttccccattcctcagaagaccccatctcggaggaatcaccctacgaaattctccac
aacagcaaatcttccatcgaaaccatcatctccgatatcctctccatcaaaaaagacgcc
aaacccaaacaactccttcgcgatctcgtcactcaaatgttccttcacttcatcactctc
cgtcaggcgaatcgctctatattgattgaggaagaccgtgtcaaaatggaaacggaacgt
gcgaaagcaccggtggatttcacgacactgcagcttcacaatttggtctatgaaaagagt
cactatcttaaagcgatcaaggcttgcaaagacttcaagtcgaaatatcccgacattgaa
ctcgtgcccgaggaagagtttttacgcgacgcgcccaaggatatcaaggattccgttttg
tcgaaagatagtgctcataatctaatgctcaagagactcaattttgagctacaccagcgt
aaagagctctgcaaacatcatgcgaaactggaacaacaaaagaaaatccttttggatact
attgcaacccggaagaagttcctgacaagtctcccttcacatcttaagtctcttaagaaa
gcatcattgcctgtacaaaaccaactaggaattatgcatacaaagaaacttaagcagcat
cattcagcagagttgcttccaccagctctttatgtgatttactcacagctattggctcac
aaggaggcctttgtagaacctattgatttggagattgtaggaagcctgaaagatgctcaa
gcttttgctcgtaagcaagctcacaaggaaacaggcatttccactgtcacagagagttct
aaattggaagatgatgttcctgacgatgaagatgatggtcagagacgtagaaaaaggcca
aggagggtaccagtcaaggagagctctgaccaagggggcatatttcaaagtcacccactt
aaaatcattatccatgtgtatgaagatgagacttctgatcctaagcctgcaaaactaatt
actctaagctttgagtacatggtgaaattgaatattgtatgtgttggaatagaaggatct
aatgatggtccagacaatgacatcttatgcaatttatttcctaatgatacaggccttgag
cttcctcaccagtccgctaagctttttgttcaagatgctataacgttcaatgctcagaga
acttcacgtccttacaaatgggctcagcacctggcagggattgatttcttgcctgaggtg
tctccattgctccccactgacaacagtgaagtagcaaggagcggagatgttatatctggt
ctctcattatatcgccaacagaaccgagtacagacagttctgcagaaaattcgctcaagg
agaaaagctcaattggctcttctgaaacagctagaatctcttaccaagcttgagttgcct
cttttgtcctgcaaaagtgttccatgggctttgcacacccctctgtgcaaattggatggc
tggtcacctataaaagccttacctgtacctcgtgaaacttcacctctggctaccatagat
aaagaggagcatgttcaagaatcaatggatgttgatgtaattgaaaattctggtgccaca
aaagaagatctggatggtatgacggaagatggagagcttcctactttacttccaaatatg
actaagtttgaccactccaaacaagcgagcttaatttccaaaagtatcattccatcactt
agtaaagttaggtccaagagtttcaaaaaagttgatgatagtacagatttcttgctggat
actgatagcgattttgatgagcccgcacaaattggaagtgaactcgaagatactgtatct
gattactgtgctggaaagtctctttcttggatagattctagtgtgaaggaatttctcctt
gttcttagcagaaaaactaacacagatgataggaatgtgaatttagaagccaagattaag
atcagtatggaatatcctctaagacctccactttttgcactgagtctttgccgtatacct
gttggggagaatcattttaagaatgatggattggagtggtacaatgaacttcgcgcaatg
gaagcggaggtcaacttgcatatggtaaagaaactacctgtcattgaacacaattatgta
ttggctcatcaagtgagttgtcttgccatgttgtttgattattatttagacgagggctca
tcatctgaaaggataaactgcactaccttggttgatgttggcttatgcaagcctgttagt
ggcgggttcctgggaagatcttttagaggaagggatcaccggaagatgatctcttggaaa
gacatgaaatttacttcaacccgaccccagtag
DBGET
integrated database retrieval system