Vicia villosa (hairy vetch): 131660862
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Entry
131660862 CDS
T09680
Name
(RefSeq) THO complex subunit 5B-like
KO
K13174
THO complex subunit 5
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131660862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131660862
03041 Spliceosome [BR:
vvo03041
]
131660862
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131660862
Spliceosome [BR:
vvo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131660862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
KIF21A
RWD
Motif
Other DBs
NCBI-GeneID:
131660862
NCBI-ProteinID:
XP_058786197
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All DBs
Position
LG3:31465125..31470150
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AA seq
810 aa
AA seq
DB search
MEDGEIEEGSIAVEEEQHQQPFPHSSEDPISEESPYEILHNSKSSIETIISDILSIKKDA
KPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMETERAKAPVDFTTLQLHNLVYEKS
HYLKAIKACKDFKSKYPDIELVPEEEFLRDAPKDIKDSVLSKDTAHNLMLKRLNFELHQR
KELCKHHAKLEQQKKILLDTIATRKKFLTSLPSHLKSLKKASLPVQNQLGIMHTKKLKQH
HSAELLPPALYVIYSQLLAHKEAFVEPIDLEIVGSLKDAQAFARKQAHKETGISSVTESS
KLEDDVPDDEDDGQRRRKRPRRVQVKESSDQGGIFQSHPLKIIIHVYEDETSDPKPAKLI
TLSFEYMVKLNIVGVGIEGSNDGPDNDILCNLFPNDTGLELPRQSAKLFVQDATTFNAQR
TSRPYKWAQHLAGIDFLPEVSPLLPTDNSEVARSEDVISGLSLYRQQNRVQTVLQKIRSR
RKAQLALLEQLESLTKLEWPLLSCKSVPWALHTPLCKLDGWSPIKALPVPSETSPLATID
KEEHVQESMDVDVIENSSATKEDLDGMTEDGELPTLLPKMTKFDHSKQASLISKSIIPSL
SKVRSKSFKKVDDSTDFLLDTDSDFDEPAQIGSELEDTVSDYCAGKSLSWIDSSVKEFLL
VLSRKTNTDDRNVNLEAKIKISMEYPLRPPLFALSLCRIPVGENHFKNDGLEWYNELRAM
EAEVNLHMVKKLPVNEHNYVLAHQVSCLAMLFDYYLDEGSSSKRTNCTTLVDVGLCKPVS
GGFLGRSFRGRDHRKMISWKDMKFTSTRPQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtgagatagaagagggttcaatcgccgtcgaagaagaacaacaccaacaa
ccgtttccccattcctcagaagaccccatctcggaggaatcaccctacgaaattctccac
aacagcaaatcctccatcgaaaccatcatctccgatatcctctccatcaaaaaagacgcc
aaacccaaacaactccttcgcgatctcgtcactcaaatgttccttcacttcatcactctc
cgtcaggcgaatcgctctatattgattgaggaagaccgtgtcaaaatggaaacggaacga
gccaaggcaccggtggatttcacgacactgcagcttcataatttggtgtatgaaaagagt
cactatcttaaagcgattaaggcttgcaaagacttcaagtcgaagtatcctgacattgaa
ctcgtacctgaggaagagtttttacgcgacgcccccaaagatatcaaggattccgttttg
tcaaaagatactgctcataatctgatgctcaagaggctcaattttgagctacaccagcgt
aaagagctctgcaaacatcatgcgaaactggaacaacaaaagaaaatccttttggatact
attgcaacccggaagaagttcctgacaagtctcccttcacatcttaagtctcttaagaaa
gcatcattgcctgtacaaaaccaactaggaattatgcatacaaagaaacttaagcagcat
cattcagcagagttgcttccaccagctctttatgtgatttactcacagctattggctcac
aaggaggcctttgtagaacccattgatttggaaattgtagggagcctgaaagatgctcaa
gcttttgctcgtaagcaagctcacaaggaaactggcatttcttctgtcacggagagttct
aaattggaagatgatgttcctgatgatgaagatgatggtcagagacgtagaaaaaggcca
aggagggtacaagtcaaggagagctctgaccaagggggcatatttcaaagtcacccactc
aaaatcattatccatgtgtatgaagatgagacttctgatcctaagcctgcaaaactaatt
actctaagctttgagtacatggtgaaattgaatattgtaggtgttggaatagaaggatct
aatgatggtccagacaatgacatcttatgcaatttatttcctaacgatacaggccttgag
cttcctcgccagtcagctaagctctttgttcaagatgctacaacgttcaatgctcagaga
acttcacgtccttacaaatgggctcagcacctggcagggattgatttcttgcctgaggta
tctccattgctccccactgacaacagtgaagtagcaaggagcgaagatgttatatctggt
ctctcattatatcgccaacagaaccgagtacagacagttctgcagaaaatccgctcaagg
agaaaagctcaattggctcttctggaacagctagaatctcttaccaagcttgagtggcct
cttttgtcctgcaaaagtgttccatgggctttgcacacccctctgtgcaaattggatggc
tggtcacctataaaagccttacctgtacctagtgaaacttcacctctggctaccatagat
aaagaggagcatgttcaagaatcaatggatgttgatgtaattgaaaattctagtgccaca
aaagaagatctggatggtatgacggaagatggagagcttcctactttacttccaaagatg
actaagtttgaccactccaaacaagctagcttaatttcaaaaagtatcattccatcactt
agtaaagttaggtccaagagtttcaaaaaagttgatgatagtacagatttcttgctggat
actgatagcgattttgatgagcccgcacaaattggaagtgaactcgaagatactgtatct
gattactgtgctggaaagtctctttcttggatagattctagtgtgaaggaatttctcctt
gttcttagcagaaaaactaacacagatgatagaaatgtgaatttggaagccaagattaag
atcagtatggaatatcctctaagacctccactttttgcactgagtctttgccgtatacct
gttggggagaatcattttaagaatgatggattggagtggtacaatgaacttcgcgcaatg
gaagcggaggtcaacttgcatatggtaaagaaactacctgttaatgaacacaattatgta
ttggctcatcaagtgagttgtcttgccatgttgtttgattattatttagacgagggctca
tcatctaaaaggacaaactgcactaccttggttgatgttggattatgcaagcctgttagt
ggcgggttcctgggaagatcttttagaggaagggatcaccggaagatgatctcctggaaa
gacatgaaatttacttcaacccgaccccagtag
DBGET
integrated database retrieval system