Vicia villosa (hairy vetch): 131661101
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Entry
131661101 CDS
T09680
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03030
DNA replication
vvo03410
Base excision repair
vvo03420
Nucleotide excision repair
vvo03430
Mismatch repair
vvo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131661101
03410 Base excision repair
131661101
03420 Nucleotide excision repair
131661101
03430 Mismatch repair
131661101
03440 Homologous recombination
131661101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvo03032
]
131661101
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131661101
Enzymes [BR:
vvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131661101
DNA replication proteins [BR:
vvo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
131661101
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
131661101
MMR (mismatch excision repair)
DNA polymerase delta complex
131661101
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
131661101
NCBI-ProteinID:
XP_058786503
LinkDB
All DBs
Position
LG3:40699798..40715020
Genome browser
AA seq
1084 aa
AA seq
DB search
MNKSNARKRPAPPSQQPPTKQALAPEDEFVDEDVFLDETLISEDEESAILRDMEQRQALA
ARLSKWTRPPLSQDYVSQSCSILFQQLEIDYVIGESHKELLPSSSGPAAIIRIFGVTKEG
HSVCCKVHGFEPYFYISCPPGMGPDDISHFHQILEARMREANRNSNVGKFVRRVEMVQRR
SIMYYQQLKSHPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMI
DCSIVGGNWIEIPAGKYKKATKSLSYCQLEFDCLYSDLTSHAPEGEYSKMAPFRILSFDI
ECAGRKGHFPEPTQDPVIQIANLVTLQGEDQPLIRNVMTLNSCSPIVGVDVMSFDKEEEV
LLAWRDFIREVDPDIIIGYNICKFDLPYLIERAAALKIAEFPILGRIRNSRVRVKDTTFS
SRQYGTRESKEISIEGRVQFDLFQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISDL
QNGNAETRRRLAVYCLKDAYLPQRLLDKLMFVYNYVEMARVTGVPISFLLSRGQSIKVLS
QLLRKAKQKNLVIPNAKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYN
LCYCTLVTPENARNFNIPPESVYKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLK
EAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKLV
EDKFTTTNGYEHNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEYISGTFIKPIKLEFE
KIYYPYLLISKKRYAGLFWTKPDHFDKMDTKGIETVRRDNCLLVKNLVTDCLHKILIDRD
IPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKTAHVELAERMRKRDAATAP
NVGDRVPYVIIEAAKGAKAYEKSEDPIYVLENNIPIDRQYYLDNQISKPILRIFEPILKN
ASKELLHGSHTRSIFKSTPSNSGIMKFAKKQSTCIGCKALLSNGDHTLCSHCKGREAELY
CKTVAQVSDLEKLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARLQLD
RWNF
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagcaacgcacgaaagcgtccggcgccgccgtcgcaacaaccgccgacaaaa
caggcactagcaccagaagatgagttcgtcgacgaagacgtgttcctggacgaaaccctc
atctccgaagatgaagaatccgcaatcctccgcgacatggaacaacgtcaagccctagct
gctcgtttatccaagtggacgcgtcctcctctctcacaggactatgtctctcaatcttgt
agcattctttttcagcagctagagattgattacgtgattggagagagtcataaagagttg
ctacctagctcgtctggacctgctgccataattagaatatttggagtgacgaaggaagga
catagtgtttgctgcaaggttcacgggtttgaaccatatttctacatcagctgccctcct
ggaatgggaccagatgatatctcccattttcatcaaattctcgaggctaggatgagagaa
gccaatagaaacagcaatgtaggaaaatttgttcgtcgtgttgaaatggtgcaaagaagg
agcattatgtactatcagcaattaaaatcccatccctttctcaaaattgttgttgcactc
ccaacgatggttgctagctgccgtggtattcttgatagaggtattcagcttgatggtctt
ggcatgaaaagcttcatgacttatgaaagcaatgtactttttgctcttcgtttcatgatt
gattgcagcatagttggcggaaattggattgaaattcctgctggaaaatataagaaggca
acaaaaagcttgtcatactgccagttagagtttgattgcttgtattccgacttgactagt
catgctccagaaggggaatattcaaagatggctccgtttcggattttgagttttgacatt
gaatgtgctggtcgcaaaggacatttccccgaacctacccaagatcctgtgatccagatt
gcgaatctggtaactttacaaggagaagaccagccattaattcgtaacgtgatgactctt
aattcatgttcccctattgttggtgttgatgtgatgtcatttgataaagaagaagaagtc
ctgctagcttggagggatttcatccgtgaagtagaccctgatattattattggatataac
atctgcaaatttgacttgccgtatcttattgagagagccgctgccctaaaaatagctgaa
tttccaattctaggccgtatcaggaacagtagagttcgagtaaaagatacaactttttca
tcaaggcagtacgggaccagggaaagtaaagaaatctccatagaagggagagttcagttt
gatttgttccaggttatgcaaagagactacaaattaagttcttattctttgaattctgtg
tcggcacatttcctttctgagcagaaggaagatgttcatcattcaattatatctgatctt
cagaatggaaatgcagaaacacgaaggcgccttgcagtttattgcttgaaggatgcatat
ctcccccagcgacttttggataaattgatgttcgtttacaattatgtggaaatggctcga
gttactggagttccaatttcctttctactttccaggggccaaagcataaaggtgctttct
caacttcttaggaaggcaaaacaaaagaatttggtcatccctaatgccaagcaggcaggg
tcagaacaaggaacatttgaaggcgccactgttttagaggcaagggctggattttatgaa
aagccaattgctactttagattttgcttccttgtatccgtctattatgatggcatataat
ttatgttattgcacactggtgacccctgaaaatgctcgcaatttcaacatccctccggag
tcagtgtacaaaacaccatctggtgaaacatttgttaaatctaatttacagaagggcata
cttcctgaaattcttgaggagctattagcagcacgtaaaagggcaaaagcagacttaaag
gaggcaaaggatccccttgagaaggctgttctagatggcagacagttggccctgaagatt
agtgcaaattctgtatatgggtttacaggggctactattggtcagttaccttgcttagag
atatcgtcgagtgtaacaagctatggtcgacaaatgatcgagcacactaaaaagcttgtg
gaagataaattcacaacaactaatggctacgaacacaatgctgaggtaatatatggagac
acagattcagtcatggtacaatttggtgtttctgctgtagaagaggctatgaacctgggg
agagaagctgctgaatatattagcggaactttcataaaacctatcaagctagaatttgag
aagatttactatccatatcttctgattagcaagaagagatatgctggtttgttttggaca
aaaccggaccattttgacaaaatggacactaaaggtattgaaacagtccgaagagacaat
tgcttgttggtcaaaaacttggtaacagattgccttcacaaaatactgattgacagggac
attcccggggcagtccagtatgtcaagaatgcaatttcagatcttctcatgaaccgtatg
gatttatcacttctggttattacgaagggtttgacaaaaacaggagatgattatgaagta
aagacagctcatgttgaactcgctgaaagaatgcgcaagcgagatgctgctactgctcca
aatgttggagacagagtaccttatgttattattgaagctgccaaaggtgccaaggcttac
gagaaatcagaggatcctatctatgtgctagagaacaacataccaatagatcgtcagtac
taccttgacaatcaaattagcaagccaattctaagaatttttgagccaattctaaagaat
gccagcaaggaacttctccatggaagccacacaagatctatttttaaatctactccgtca
aacagcggtataatgaaatttgccaagaaacagtctacttgcattggttgcaaagcttta
cttagtaatggagaccacactctctgctcacattgcaaaggaagggaagctgaattgtac
tgtaaaactgtagctcaagtgtcggatcttgagaaactttttgggaggttgtggacacag
tgtcaagagtgccaaggttcacttcatcaggatgttctctgcacaagtcgagattgtcca
attttttatcgacgcaagaaggcacagaaagatatggctgaagcaaggttgcaattggac
agatggaacttctaa
DBGET
integrated database retrieval system
