Vicia villosa (hairy vetch): 131661324
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Entry
131661324 CDS
T09680
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131661324
Transcription machinery [BR:
vvo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131661324
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
GerE
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
131661324
NCBI-ProteinID:
XP_058786814
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Position
LG3:complement(48120459..48124857)
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AA seq
515 aa
AA seq
DB search
MGVVTVSSSAARTPLGLSKKFSTHHPVLKRPLTVAFKGDNKQNDTVLVVTKEKIPTKDVT
VNTHKKRIAKTKKLPKKARGVLIEETFQSSLDVDYNEAAAILENIFKLSPTLDVCDADYI
DSAIKRVSRRGRKIGDASKEGLENDRVVRTQKTKAKRMNLDERIALKKDNDSEDVTPTRK
KRNGRNRTGKFEELRREFSVPVDLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVK
EDLQKQLEREPTAEEIGDATNMSTTKVKKAIEIGRAARNRLIKHNLRLVLFVINKYFSDL
ANSQRFQDLCQAGVKGLMTAIDRFEPNRRFRLSTYGLFWIRHAITRSMTLSSFSRVPFGL
ESVRAKIRKAKIELTYKLQKPPTEEEIIERAHISPERYRDVMMASKPFLSLHARHPTTQD
EYIDSIVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIA
SNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagttcagctgctcgaactccgctaggattgagcaagaag
ttttcgactcaccatccggtattgaagaggccgttaacggtagcgtttaaaggagataat
aagcagaatgacacggttttggttgttacaaaagagaaaattccgacgaaagatgtaacg
gtcaatacgcacaagaaaaggatagcgaaaacgaagaaattgcctaagaaggcaagaggt
gttttgattgaggaaacttttcaatcgtcgttggatgttgactataatgaagctgctgct
atacttgaaaatatattcaaacttagcccgacgttagatgtgtgtgatgcagattatata
gatagtgcgatcaaaagagtttctcgaaggggtaggaagattggtgatgcaagtaaagag
gggttagagaatgatagggtggttagaacccagaaaacgaaagccaaacggatgaatctt
gatgagaggattgcattaaaaaaggacaatgatagtgaagatgttactccaactcggaaa
aaaagaaatggcaggaatagaactgggaaatttgaggaacttcgtagggagttttcagta
ccagttgatttggtgagtctggactggaaaaaaatgaaaatacctccggttcttccttct
tcggagcatgcatttttattcaagttgatgcaaccaatgaaggcactccttcaagtgaaa
gaagatttacagaagcagctggaaagagaacctacagcggaagaaataggtgacgcaaca
aatatgagcactactaaagtaaagaaagcaatagagattggtcgagctgcaagaaacagg
ctgataaagcacaatctccggcttgtcttgtttgtgatcaacaaatatttttcagattta
gccaatagccaaaggtttcaagacctttgccaggccggagttaagggacttatgacagca
attgaccgttttgaaccaaaccggagatttcggctatcaacctatggtttgttttggata
agacatgctatcactcgttccatgaccctctcaagcttctcacgtgtgccctttggactt
gagtcggttagagcaaagatccgaaaagctaagattgagttaacatataagcttcagaag
ccaccaacagaggaagaaataatagaaagagctcatatatcacctgaaagataccgcgat
gtaatgatggcatcaaaaccctttctttcattgcatgcaagacatccaacaacgcaagat
gagtatatcgatagcatcgttgatgatggtggtgttgatggtgataacaggaggcaacct
gctctactaaggcttgctcttgatgatgtgcttgattccctgaagcctaaggaaaacttg
gtgatcagacagagatttggacttgatggtaagggtgacagaactttgggagaaatcgcc
tcaaacttgaacatctctagggaaatggtgagaaagcatgaagtcaaggctctcatgaag
ctcaagcattcagctcgattggattatcttcgtcgatatgttgtataa
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