Vicia villosa (hairy vetch): 131661588
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Entry
131661588 CDS
T09680
Name
(RefSeq) regulator of nonsense transcripts UPF2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131661588
03015 mRNA surveillance pathway
131661588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131661588
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
131661588
mRNA cycle factors
P-body specific factors
131661588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
131661588
NCBI-ProteinID:
XP_058787164
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Position
LG3:58730986..58743753
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AA seq
1194 aa
AA seq
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MTIDKEVSPVAASDASFSMAENQQEAVDHLEEIKKSIEAKMALRQSNLNPDRPDSGFFRT
LDSSIKRNTAVIKKLRQINEEQRESLMDDLRSVNLSKFVSEAVGAICDAKLRSSDIQAAV
QICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDESDSDRNLKAMKKRSSLKLLIELFLVGV
IEDGGIFINIIKDLTSVEQLKDREATQTSLTLLSSFARQGRIFLGLSVSGPEVQEEFLKG
LNITVDQKKVIRKACFSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENLSAYEK
LRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAVSSASGKDSSVEPIWDDED
TRAFYECFPDLRAFVPAVLLGETEPKVNEQSVKSQDQLTEILPESDKSQLITFESGEGST
ESTVLPEGESTERVDDKEEKEKSKDLDIDKEKEKENEKKGENDKEKLRSLEGTNLDALLQ
RLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLAYYSRMVATLSTCMK
DVSSLLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKVAPAGLVFSCLKACLDD
FSHHNIDVACNLLETCGRFLYRSPETSIRMGNMLEILMRLKNVKNLDPRHSTLVENAYYL
CKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSDCEPYLLKCFMKV
HKGKYDQIHLIASLAAGLSRYHDEFVVAIVDEVLEEIRVGLELNDYGMQQRRVANMRFLG
ELYNYKHADSSVIFETLYLILIYGHGTPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGS
SKKKLDRFLIHFQRYILSKGALPLDVEFDLQDLFADLRPSMVRYNSADEVNAALVELEEH
DRIVSADKASSEKHSDTDKPLSRTTSTAMVRNKQNNDNGTEENGVQDNVNDGEHDSGSDV
IDVEGHDDEELDEENHDDGCETEDDEEDEDGPASDDEDEVHVRQKVTEVDPLEEANFDQE
LKAVLQESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDDDADINK
EVQVKVLVKRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEEF
NGLGAQPTNWMQSGSNKAGGRGNSFEGTSGRGGGSRHRHHNYYSGGGIYYSRRR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgactattgataaggaagtgagtcctgttgctgcctctgatgcttccttttccatggcc
gaaaatcagcaggaagctgttgatcaccttgaagaaatcaagaaatcaatcgaggcaaaa
atggccttacgtcaaagcaatttgaatcctgacaggcctgactcaggattttttaggacc
ttggattccagcattaagcgcaacactgcagttattaagaaactgaggcagattaatgaa
gagcagcgtgaatcactaatggatgacttgcgaagtgtcaacttaagcaaatttgttagt
gaagcagtgggggctatatgtgatgcaaagcttagaagttctgatatacaagcagctgtt
cagatatgctctctgcttcatcaaaggtacaaggatttcgtgccaactctgattcaaggg
cttctcaaagtcttctctcctggaaaatctggtgatgaatcagattcagacagaaactta
aaggcaatgaagaagcggagctctctgaaacttctaattgagctttttttggttggtgtt
attgaagatggtggaatttttatcaatattataaaagatcttaccagtgtggaacagctg
aaagaccgggaagctacacaaacaagtttgacccttctttccagctttgctcggcaagga
agaatttttctaggactttctgttagtgggccggaagttcaggaagagtttttgaaaggc
cttaacatcacggtagatcagaagaaagttatccggaaagcatgtttttcattttatgat
gctgcagctgaactacttcagtccgagcattcttcacttcgattaatggagcatgaaaat
tcaaagattttaaatgcaaaaggcgagctaagcgatgaaaatctctctgcatatgaaaaa
cttcgtaaatcatatgaccatttgtaccgcaatgtctcatcattagctgaagcacttgat
atgcagcctcctgtaatgccagaggatggccacacaacacgggttactagtggggaggag
gccgtttcatctgcttctgggaaagattcttctgttgaacccatatgggatgatgaagat
acaagggctttttatgaatgttttccagatcttagagcttttgttcctgctgtgcttttg
ggagaaacagagccaaaagtcaatgagcaatctgtgaagagtcaagatcaattaactgaa
atattacctgaatcagacaaaagccaactgatcacctttgaaagtggagagggctccaca
gagtctactgttttaccagagggggaaagcactgagagagtggatgataaagaagaaaaa
gaaaagtctaaagatttggacatagacaaggaaaaagaaaaagagaatgaaaaaaaaggg
gagaatgacaaagagaaactcagaagtcttgaaggaacaaatttggatgctctattgcag
aggcttcctggttgtgtgagccgggaccttatagatcaattaactgtagagttctgttat
ctaaattcaaaatctaatcggaaaaaacttgtgagggctttgttcagtgttccaaggact
tctctagagctgctagcgtattactcacgcatggttgctacactctcaacttgtatgaag
gatgtctcctcccttctattgcagatgttagaggaggagttcaacttcttaataaataaa
aaggaccagatgaatattgagacaaagatcaggaatatcaggttcattggagaactttgc
aagttcaaagttgcccctgctggcctggtcttcagttgtttgaaggcctgtttagatgat
tttagtcatcacaacattgatgtagcttgcaaccttcttgaaacatgtggtcgttttctg
tatcgttctccagaaactagtatacgcatgggtaacatgttggagatactaatgcgcttg
aagaatgttaaaaacttggatcctagacatagcactttggtggagaatgcatactacctt
tgcaagccacctgaaaggtctgcacgagtagctaaagtccgccctccgttgcatcagtat
atcagaaaattacttttctctgatcttgacaagtctaccattgagcatgtgctgaggcag
cttcgtaaattaccatggagtgattgtgaaccgtatcttttaaaatgcttcatgaaggtt
cacaaaggaaaatatgatcagatccacctgattgcatctcttgctgctgggttaagtcgt
tatcatgatgagtttgttgtagctatagtcgatgaggttttggaggagattagagttggg
ctggaattaaatgactatgggatgcaacaaagacgcgttgccaacatgcgatttttaggg
gagctttacaactacaagcatgctgactcatctgttatttttgagacactatatctcatt
cttatatatggccatggaacaccagagcaagatgtactcgatccacctgaagattttttc
cgcataaggttgatcattactctacttgaaacttgtggccattactttgatcatggctct
tctaagaagaaacttgatcggttcctgatacacttccaaaggtatattttaagcaaaggt
gcattgcctctggatgttgaatttgacttgcaggatctgtttgcggacttgcgtccaagt
atggttcgttacaattctgctgatgaggtgaatgcagctctagtggaactcgaggagcat
gatcgaatagtttctgctgataaggccagtagtgaaaaacattctgacactgataagccc
ttaagtaggaccacttccactgcgatggtccgcaataaacagaacaatgataacggcact
gaggaaaatggagtgcaagataatgtcaatgacggtgagcatgattcagggagtgacgta
attgatgtggaaggacatgatgatgaagagttggatgaggagaatcatgatgatgggtgt
gagactgaggatgacgaggaggatgaggacggacctgcttctgatgatgaagatgaagtc
catgtaagacagaaggtgacagaagtcgacccattggaagaagccaattttgatcaggag
ctcaaggctgtcttacaggaaagtatggagcagcggcgactggagctgcggggtcgtcct
acattgaatatgatgattccaatgaatgtatttgaaggatccgccaaggatcatcatggg
agaggaactggtggggaaagtggcgacgaagccttagatgacgatgctgacataaacaaa
gaggttcaggtgaaagttctggtgaagcgtgggaacaaacaacaaacaaagcagatgtac
atccccagtgattcctcactggtgcagagtacgaaacaaaaagaagcagctgagcttcag
gagaaagaagacattaagaggcttatcttggagtataatgatagagaggaggaagagttt
aatggattaggggcccaaccaacaaactggatgcaaagtggaagtaacaaagctggtggt
cgtggaaactcttttgaaggaaccagtggcaggggtggtggatcacggcatcgtcatcat
aactactattctggcggtgggatctactatagtagaagaaggtga
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integrated database retrieval system
