Entry |
|
Name |
(RefSeq) THO complex subunit 4D-like
|
KO |
|
Organism |
vvo Vicia villosa (hairy vetch)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:vvo00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131661853
09122 Translation
03013 Nucleocytoplasmic transport
131661853
03015 mRNA surveillance pathway
131661853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:vvo03019]
131661853
03041 Spliceosome [BR:vvo03041]
131661853
Messenger RNA biogenesis [BR:vvo03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131661853
TREX complex
131661853
Spliceosome [BR:vvo03041]
Complex C
Other components
EJC/TREX
131661853
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131661853
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
LG3:complement(72345305..72350007)
|
AA seq |
291 aa
MASSLDMSLDDRIKNRTNRGRGRGRGKALSGRGSGALGGGRRTGAVNGRRMTGPGNGGRA
TGAVRRGPLMVNTRPSSYAIAKSIRRTKPFPWQSDLLEDSLRAAGIQGVEAETKLYVSNL
DRGVTNEDIRELFSELGDLKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDG
KPMKIEIVGTKSELPVTARVNVTGMNGQRKRTVVMTPRGGRGGGSAVSNRGAGWGRRGGS
RGGSGSGRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYHAEAMNIS |
NT seq |
876 nt +upstreamnt +downstreamnt
atggcttcttccttggatatgtcacttgatgatagaattaagaacaggactaacagaggc
agaggcagaggacgtggcaaagccctttcaggccgtggaagtggggctctaggaggtgga
agaaggaccggtgctgttaatggtagaagaatgactggtcctggtaatggtggaagagca
actggtgctgttcgtagaggcccactcatggtcaacactcgcccatcatcttatgctatt
gccaagtctattcgcagaaccaagccttttccatggcagagtgatttgttagaggatagt
cttagagctgctggaattcaaggagtagaagctgagacaaagttgtatgtttcaaacttg
gacagaggagtaaccaatgaagacataagggagcttttctctgagcttggagacttgaag
cgctatgctgttcattatgacaaaaatgggcacccaactggatcagctgaagtggtttat
aatagaagaagtgatgcatttgctgctcttaaaagatataacaatgtacttttggatgga
aagcccatgaaaatcgagattgtgggaacaaaatcagaattgcctgtcactgcacgggtg
aatgtaactgggatgaatggacagaggaagaggacagttgtaatgacgcctagaggtggt
cgaggtggaggttctgctgtgtcaaatcgcggtgctggttggggacgtcgaggtggctca
aggggtggcagtggtagtggacgtggtcggggtcgtggccgtcctggcaggggtggaggt
cgtggtcgaggaagaaaggatggagttgaaaagtcagctgagcaacttgacaaggaactg
gagacctatcatgcagaggctatgaacatctcataa |