KEGG   Vicia villosa (hairy vetch): 131661853
Entry
131661853         CDS       T09680                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03013  Nucleocytoplasmic transport
vvo03015  mRNA surveillance pathway
vvo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131661853
  09122 Translation
   03013 Nucleocytoplasmic transport
    131661853
   03015 mRNA surveillance pathway
    131661853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvo03019]
    131661853
   03041 Spliceosome [BR:vvo03041]
    131661853
Messenger RNA biogenesis [BR:vvo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131661853
    TREX complex
     131661853
Spliceosome [BR:vvo03041]
 Complex C
  Other components
   EJC/TREX
    131661853
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131661853
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 131661853
NCBI-ProteinID: XP_058787476
LinkDB
Position
LG3:complement(72345305..72350007)
AA seq 291 aa
MASSLDMSLDDRIKNRTNRGRGRGRGKALSGRGSGALGGGRRTGAVNGRRMTGPGNGGRA
TGAVRRGPLMVNTRPSSYAIAKSIRRTKPFPWQSDLLEDSLRAAGIQGVEAETKLYVSNL
DRGVTNEDIRELFSELGDLKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDG
KPMKIEIVGTKSELPVTARVNVTGMNGQRKRTVVMTPRGGRGGGSAVSNRGAGWGRRGGS
RGGSGSGRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYHAEAMNIS
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcttcttccttggatatgtcacttgatgatagaattaagaacaggactaacagaggc
agaggcagaggacgtggcaaagccctttcaggccgtggaagtggggctctaggaggtgga
agaaggaccggtgctgttaatggtagaagaatgactggtcctggtaatggtggaagagca
actggtgctgttcgtagaggcccactcatggtcaacactcgcccatcatcttatgctatt
gccaagtctattcgcagaaccaagccttttccatggcagagtgatttgttagaggatagt
cttagagctgctggaattcaaggagtagaagctgagacaaagttgtatgtttcaaacttg
gacagaggagtaaccaatgaagacataagggagcttttctctgagcttggagacttgaag
cgctatgctgttcattatgacaaaaatgggcacccaactggatcagctgaagtggtttat
aatagaagaagtgatgcatttgctgctcttaaaagatataacaatgtacttttggatgga
aagcccatgaaaatcgagattgtgggaacaaaatcagaattgcctgtcactgcacgggtg
aatgtaactgggatgaatggacagaggaagaggacagttgtaatgacgcctagaggtggt
cgaggtggaggttctgctgtgtcaaatcgcggtgctggttggggacgtcgaggtggctca
aggggtggcagtggtagtggacgtggtcggggtcgtggccgtcctggcaggggtggaggt
cgtggtcgaggaagaaaggatggagttgaaaagtcagctgagcaacttgacaaggaactg
gagacctatcatgcagaggctatgaacatctcataa

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