Vicia villosa (hairy vetch): 131661975
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Entry
131661975 CDS
T09680
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvo03009
]
131661975
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131661975
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
Helicases
131661975
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
131661975
NCBI-ProteinID:
XP_058787621
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Position
LG3:complement(78237021..78242041)
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AA seq
591 aa
AA seq
DB search
MAMEPEFPNKALTSTRFSDLKPPLSDPVLQALTDSAFDFCTPVQAATIPLLCSFKDVAVD
AATGSGKTLAFVIPLVEILRRSSSNPKPHQVLGIIISPTRELASQIYHVAQPFISTLPNV
KSMLLVGGVEVKTDMQKIEEEGANVLIGTPGRLHDIMNRMDVMDFKSFEILILDEADRLL
DMGFQKQINAIITQLPKLRRTGLFSATQTEAVQELAKAGLRNPVRVEVRAETKTANGGAA
STQLESSKTPSGLHIEYLECEADKKPSQLVDFLIKNRSKKIIIYFMTCACVDYWGVVLPR
LSVLKGFSLISLHGKMKQTVREKALSSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPP
QDPNVFVHRVGRTARLGKQGHAVIFLLPKEESYVEFLRIRRIPLQERSSSDNAPDVISEI
RSAATKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEIGKLATGHGLLQLPLVPEVK
RHSLSIEGFEPVKDINFEDIKFRDKSREKQRKKNLQTKKEAKEKEPKPKKLKKTPNVPDV
MRKKTAKQRRAQQTVEDEEELTQEYRLLKKLKKGVIDEDEYAKLTGTEDLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaacccgagttccccaacaaagctttaacaagcactcgcttttccgacctc
aaacccccactttccgatcccgtactccaagccctcacagactccgccttcgatttctgt
acccccgttcaagccgccaccatccccttactctgcagcttcaaagacgtcgccgtcgac
gccgccaccggttcaggcaaaaccctagctttcgttatcccacttgtcgaaattcttcgt
cgctcctcctccaatcccaaacctcaccaggttttggggataattatatctcctacaagg
gaactagcatcccaaatttatcatgttgcacaaccttttatttcaaccttacccaatgtt
aagtcaatgctactagtaggtggagtggaagttaaaactgacatgcagaaaattgaggaa
gaaggtgctaatgtattgattggcaccccgggtcgattgcacgacattatgaatcggatg
gatgttatggatttcaaaagttttgagattttgattttggatgaggctgatagactctta
gatatgggattccagaagcagataaatgctatcataactcagttacctaagcttagaagg
actggcttattttccgctactcaaactgaagctgtgcaagagcttgctaaagcaggattg
aggaatcctgtgagggttgaagttcgagcggaaactaaaactgcaaatggtggtgcagca
tcaacacagctagaatcttcaaagacaccttcaggtcttcacatcgagtacttggaatgt
gaggctgataagaaaccgtcgcagctagtagatttccttattaagaaccgctcgaaaaaa
attataatatatttcatgacttgtgcttgtgttgactattggggagttgttcttcctcgc
ctttctgttttgaaaggcttctccttgatttcccttcatggaaagatgaagcagactgtg
agggagaaggcactatcttcatttacatccctctcaaatggaattcttttgtgtacggat
gttgcagcacgtggacttgacatacctggcgtagactgtatagtgcagtatgatcctcct
caagacccaaatgttttcgtacatagggtaggtcgaactgctcggctgggtaaacaagga
catgctgttatcttcttattaccaaaggaggaatcatatgtagaattcttgcgtataaga
agaattccacttcaagaaagatcaagctccgacaatgcacctgatgttatatccgagatt
cgttctgcggcaacaaaagatcgcgatgtcatggagaagggagtcagggcatttgtttct
tacattcgtgcttataaagagcatcactgctcttatattttcaggtggaaagaacttgag
atcggcaagttagccaccggacatggcttattgcaacttcctttagtgccggaggtaaaa
cgccactcactatccattgagggatttgaacctgttaaagatatcaatttcgaggacatt
aagttcagggataaatcaagggagaaacaaagaaagaaaaatctgcaaacaaagaaagaa
gcaaaagagaaagagcctaaacctaaaaagctaaagaaaactcccaatgtacccgatgtc
atgaggaagaaaacagccaaacagagacgtgcccagcagactgttgaagatgaggaagag
ttgacgcaagaataccgcttgttgaagaaattgaagaaaggggtcattgatgaggatgaa
tatgccaagttgacgggcacagaagacttactttga
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