Vicia villosa (hairy vetch): 131662172
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Entry
131662172 CDS
T09680
Name
(RefSeq) uncharacterized protein LOC131662172
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131662172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131662172
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131662172
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131662172
Messenger RNA biogenesis [BR:
vvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
131662172
DNA repair and recombination proteins [BR:
vvo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
131662172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Utp25_C
NMO
Motif
Other DBs
NCBI-GeneID:
131662172
NCBI-ProteinID:
XP_058787865
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Position
LG3:94275426..94283322
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AA seq
896 aa
AA seq
DB search
MNTTLSVLKDYFGFMSFRPYQQEVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGI
VVSPLISLMQDQVMALKQRGIKAEYLSSAQKDYTIQGKAERGQFDILFMTPEKACTIPTS
FWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKVRF
DITNSLKLNNPYIVVGSFDRPNLFYGVKQFNKGQYFIDELVEEISKEVANGCSTIIYCTT
IKDVEQIYKSLMDVGINAGMYHGQMDGKSREESHRLFVRDEKQVMVATIAFGMGIDKPNI
RKVIHYGCPKNLESYYQESGRCGRDGIASACWLYYTRSDFSKGDFYAGDLKSENQKKAVM
ESLLNAQHYCLSATCRRKFLLEHFGEKFAADRCGNCDNCTVLKQHRDMSKEAFLLMACIH
SCKGRWGLNMPIDILRGSRAKKIMEAQYDQLPLHGLGKAYQANWWKALGHQLISLGYLKE
FVSDVYRNVSVSSKGEQFLATCRPDYQPPLVLPLVGELAEEETRSAEEIKILSASESGGF
SEAEGQLYQMLLEERLNLARSVGTAPYALCGDQTIRKIALTRPSTKARLANIDGVNQHLV
TTYGDHFLQAIRKLSQELKLSLDGEPVFQTNEVRKVSPVVSIKSTKLSGAKLDAWKMWHE
EGLSIQRIANFPARAAPIQEQTVVQYLLDAALEGLPIDWTRFCEAIGLKQDFISAIRGAI
AKVGSADKMKPIKNELPEEITYPHIKAYLTMQTCGVSLESNQSGKDGEAVNNASNLSEPS
SVTRDTENHLEANVVTESIKETDEVVPSGPVNVCQVQEFPTSKRLKVSETEEVKIIKLKA
TESSVVEWLKNLDEGATLTDMLEHFNGSNEDSIVELLSSLECDFSIYKKRNVYRAM
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccactctctccgttctcaaggattacttcgggtttatgagttttcgaccttat
cagcaagaggttattgagaaaattattgagaaaagggattgtttggtagttatggctact
ggtagtggcaagtcattatgttatcaagtgcctccgttggttgtgaaaaagactgggata
gttgtaagccctttaatatcattgatgcaagatcaggtaatggctttgaaacagcgaggt
atcaaagctgaatatctttcaagtgctcagaaggattatactattcagggtaaagctgag
cgtggccaatttgatattctgtttatgactcctgagaaggcatgcacaattcctaccagt
ttctggtccaacttgctaaaggaagggattagtctttttgctgttgatgaagcacattgt
atatcagaatgggggcatgactttagggtagaatacaagcagttagacaagttacgtggt
gttctgttagatgttccttatgttggtctaactgcaacggctactgaaaaggttcggttt
gacatcaccaattccttgaagttgaataatccttatattgttgttggttcatttgatcgc
ccgaatcttttctatggtgtcaagcaatttaacaaaggacaatattttattgatgagctt
gtggaagaaatttcaaaagaagttgctaatggttgttcaactataatttactgcacaaca
atcaaagatgtagaacagatatataagtcacttatggacgttggtattaatgctggaatg
taccacggtcaaatggatggaaaatcacgagaggagtctcacagattatttgttagagac
gaaaagcaagtcatggtggctacaattgcctttggcatgggcatagataaacctaatata
agaaaagtgattcattatggctgccctaaaaatctagagtcctactaccaggaaagcggg
agatgtggtagagatggtatagcttctgcttgttggctttactacacaagaagtgacttt
tcaaagggcgatttttatgctggagatttaaaatcggaaaaccaaaaaaaagctgttatg
gagtcattgcttaacgctcaacactattgtttgtcggcaacttgcagaagaaagttcttg
ctagaacactttggagaaaaatttgcagctgatagatgtggaaactgtgataactgcaca
gtcttgaagcaacatcgcgacatgtcaaaagaagcctttcttctaatggcttgcattcat
tcatgcaagggaagatggggccttaatatgccaattgacatcctgcgcggttctcgagca
aagaaaataatggaagctcaatatgaccagcttccacttcatggacttgggaaagcatac
caagcaaattggtggaaagcacttggacatcaattgatttctctaggttatttgaaggag
tttgttagtgacgtgtacagaaatgtaagtgtcagttcaaaaggagaacaatttttggcc
acatgtagaccagactatcaacctcctttggttttgccattggttggtgagctcgcagaa
gaggaaactagaagcgcagaagaaatcaaaattttgtctgcttcagaatctggaggtttt
tcagaggctgaggggcagctctaccaaatgcttttagaagaaagattaaatcttgcacga
agtgttggaacagctccatatgctctatgtggtgatcaaacaatcagaaaaattgccttg
acaagaccatctacaaaagcacggctagcaaatattgatggtgtgaatcagcacttagta
acaacatatggagaccattttcttcaagccattcggaaactatcacaagaattaaaacta
tcattggatggtgaaccggtattccaaactaatgaagtacggaaagtatctccggtagta
tcaatcaaatcaaccaagttgtcaggagcaaagttagacgcatggaaaatgtggcatgag
gaaggtctttctattcagaggattgcgaactttccagctagagcagctcctattcaagaa
caaactgttgttcagtatctgttggacgctgccctagaaggattaccgattgattggaca
agattctgcgaggcgatagggctgaaacaagatttcatatcagcaattcggggtgctatt
gcaaaagttggatctgctgataagatgaagcctataaaaaatgaattgccagaagaaata
acgtatccgcacatcaaggcttacttaacaatgcaaacctgtggagtatccttagaaagt
aaccagtctgggaaagatggtgaagctgtaaacaatgcatcaaatttgtcagaaccatct
tcagtaacacgcgacacagaaaatcatcttgaagctaacgttgttaccgaaagtataaag
gaaactgatgaagtggtaccttctggaccagtcaatgtttgccaggtacaagagtttcca
acaagcaaacgactgaaagtcagcgaaacagaggaagtaaaaataattaaattgaaagct
acagagagttctgttgtagagtggctgaagaaccttgatgaaggggctactttgactgat
atgttggagcacttcaatgggtccaatgaagattccattgttgaactgctaagttccctt
gagtgtgacttttcgatatataagaaacgtaacgtgtacagggctatgtaa
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