Vicia villosa (hairy vetch): 131662252
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Entry
131662252 CDS
T09680
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131662252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131662252
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131662252
mRNA degradation factors
5'-3' decay
Decapping complex
131662252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Med13_C
FlgN
DUF4197
Motif
Other DBs
NCBI-GeneID:
131662252
NCBI-ProteinID:
XP_058787969
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All DBs
Position
LG3:complement(104662938..104672673)
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AA seq
1385 aa
AA seq
DB search
MSNPNQPQPPTPFDMHSFFNPPNPNLNPSPNPIISSQFPPSAPSPPPSSSSSYPPPAGPF
PPQPFPHHHNNLNNNSSNYPYDHLNNFPIHHRSLSFPTPPLQPPPSNPNPNAGARLMALL
SAPPQQQQHQQLVSVSVPFTSDYAPAANLPSPSPAASITAANAAAAALIRLPSSKVPKGR
HLIGDHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPILGRQIAVNKSYICYGLKQGNIR
VLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGCVFVWKISEGPDDEDKPQITA
NIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKIGNGEAFVAEDPPKCP
LDKLIDGVQLVGTHDGEVTDLSMCQWMTSRLVSASQDGTIKIWEDRKTQPLAILRPHDGH
PVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSSNEEGWLLPSNTESWKCTQTLELKSS
AGPSLKDAFFNQVAALPYAGLLLLANAQRNAIYAVHLGYGPNPESTHMDYIAEFTVTMPI
LSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENVGLDRVDSNVSRDAII
AEGFASLDSSAGRTSEMPLPSSTPKITMQASSTESGLVARYPLSSGHIEAPVSREISSSN
IETKNVPLVPSSSDANIVCVPSPPLPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVE
RQMDTIHRNLSDQLNSDSKNDENKTNQDDISSVLNPSVMFKQPTHLVTPSEITKASSSSE
TNMIDRMNEVENKIQDVGNAEVEVKVVGEARPNQNDEFGKQGPQQNPVSDGKEKFFCSQA
SDLGIEVAREFSAIGGETYITEESGQVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDS
STSTVVPPSPSSNSKGKRQKGKNPQPTGPSSPSPSVCNSTDSSNEPNGIPNLPSTENGLP
QIVAMQDSLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRSMEKAVKSNADALWAR
IQEENAKNEKLLRDRIQHVTGLITNFTNKDLPAIVEKTVKKEMASVGQAVIRSMSPTIEK
IISSTIVESFQRGVGDKAVNQLDKSVNSKLETTVARQIQAQFQTTAKQALQDALKSSFET
SVVPAFEISCKTMFEQVDATFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQT
LTREVLEGQRKLMSLATSRTNSGTLSTLPIQLNNGPLLPEKVEAPLDPTKELGRLISERK
FEEAFIAALHRSDVSIVSWLCSQVDLHRLLTMVPLPLSQGVVLSLLQQLACDINNDMSRK
IAWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRSLPTISGADLSSTRLLLHVINSM
LTTCK
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccaatcaaccccaacctcccactcctttcgatatgcactctttcttcaat
cccccaaaccctaaccttaaccctagccctaatcctatcatctcttcccaattcccgccg
tctgctccgtcaccgccgccgtcttcttcctcctcttaccctccgcccgccggtcctttc
cctcctcaacctttcccccaccaccataacaacctcaacaacaacagcagcaactacccc
tacgatcaccttaacaatttcccaatccaccaccgttccctctctttccctactccccct
ctccaacctccaccttccaatcccaatcccaacgccggtgcacgtctcatggctctcctc
agcgcccctcctcaacaacaacaacaccaacaactagtttccgtctctgttccattcact
tccgactacgctcctgctgctaatttaccttccccttcgcctgccgcctctattacagcc
gccaatgcagctgcggccgctctgattcggctaccgagtagcaaggttcctaagggaagg
cacttgattggggaccatgttgcgtatgacgtggatgttaggttgcctggtgaagtacag
cctcagcttgaagttgctccgattactaagtacgggtcggatcctaatccaattctcggt
cgacagattgctgtgaataagtcttatatatgttatgggttgaaacaggggaatattaga
gtgcttaacattcacactgcagttagatctttgcttagaggccacactcagagagtcaca
gacttggcgttctttgctgaagatgttcatttgctggctagtgttggcacagatggctgt
gtctttgtgtggaaaatttctgaaggtccggatgatgaagataagcctcaaattactgcc
aatattgttattgctattcaaatagtaggagaggagaaagttgaacatcctcaaatatgc
tggcactgccacaaacaagagattttgatagttggtatgggaaaacatgttctgagaatt
gacaccaccaaaattggaaatggtgaagcctttgtggcagaagatccccctaaatgtccc
cttgacaaactcattgatggggttcagcttgtaggaacacatgatggggaggtcactgat
ttgtcaatgtgccaatggatgacaagtcgactggtatctgcatcacaggacggcacgata
aagatatgggaagatcggaagacacaaccacttgctattttgagacctcatgacgggcat
cctgttttttctgctacgttttttactgctcctcaccagcccaatcatattgtccttatc
acagcaggaccacaaaatcgggaagtgaaactctgggtctcatcaaatgaagaaggttgg
ctgctcccaagcaatactgaatcttggaaatgtactcagactttggagttgaagagttca
gctgggccgtctcttaaggatgcattctttaatcaagttgcagcattgccttatgcaggt
ctgcttttacttgctaatgcacagaggaatgctatatatgctgtgcacttaggatatggt
cctaatcctgaatcaactcacatggattatatagccgagtttactgtcaccatgcctatt
ctgagttttaccggaactagtgatattttgcctcatggcgaacatattgttcaggtttat
tgtgttcagacactggctattcagcagtatgccttggatttagcacaatgcttgcctccg
ccattagaaaatgtgggactagatagggtagattccaatgtttcccgagatgcaattatt
gctgaagggttcgcctctttagactcgtctgcgggtagaacatctgagatgcctttaccc
agttctactcccaaaataacaatgcaagcaagtagcactgagagtggtcttgttgcaaga
taccctttaagttcgggtcatattgaggcacctgtttctagagaaatcagcagttcaaat
attgagactaaaaatgttccgttggttccttctagtagtgatgctaacattgtttgtgtt
ccttctccacctcttcctttgagcccaaggttgtccaggaagctttctgatttcaggagt
ccacaatctaacttgagcgatcatgttggggaccaagctgttaatgattattcagttgaa
agacaaatggataccattcaccggaacttgtccgaccaattgaatagtgattcaaagaat
gatgaaaataaaaccaatcaggatgacatttctagtgtacttaacccttctgtcatgttt
aagcaaccaactcatctggttacaccatctgagattacaaaagccagttcctcgtctgag
actaatatgatcgatagaatgaatgaagtagaaaataagatccaggatgtgggtaatgca
gaagtagaggtgaaagtggtaggtgaggcaaggcctaatcaaaatgatgaatttggaaag
caggggccacaacaaaacccagtttctgatggcaaagaaaaattcttttgctctcaggct
tctgatcttggcattgaggtggcccgagaatttagtgcgataggtggggaaacttacatt
acagaggaatccggacaagttgattctactggaggggattcactggcacaaccctctaat
gcaggcgaggatggacttcaagacttgccaaaagatgtccatgaaaaggtttctgactca
tctacatcaacagtagtaccaccctcaccttcttctaattcaaaaggaaagagacaaaaa
ggtaaaaatcctcaaccaacaggcccgtcttccccatctccaagtgtatgcaattcaact
gattcgtccaatgagccaaatggaattccaaatctcccatctactgaaaatggtttgcct
caaattgtggcaatgcaagattcactcaatcagttattgacaatgcaaaaggagatgcag
aaacaaatgacaatgatggttgcagttccagttaccaaagagggtagaaggcttgaagca
gccctagggagaagcatggaaaaagctgttaagtccaatgctgatgctttgtgggctaga
attcaagaggagaatgcaaaaaatgaaaagttgttacgagaccgtattcaacatgttaca
ggtttgattactaactttacgaacaaggatctaccagcaatagtggagaaaactgtaaag
aaggaaatggcttcagttgggcaagctgtaattcgttcaatgtctcctactattgagaaa
ataatatcctctactattgtggaatccttccagagaggagtgggcgacaaggcagtgaat
caacttgataaatcagttaattcaaaactcgaaactactgtagctaggcagatccaagca
cagtttcagacaactgccaaacaagcgcttcaggatgcactgaaatctagttttgaaaca
tcggtggttcctgcatttgagatctcctgtaaaaccatgtttgagcaagtggatgctaca
ttccagaaaggcatggctgaacattcaaatgcagtgcagcaacgacttgaatctgggcct
acttcattggcaatgactctaagggattccattaattcagcctcatcagttactcaaacc
ctgaccagagaagtgctcgagggtcagagaaagctaatgtcacttgcaacctcaagaaca
aactcaggcacattgagtactctgcccatccaactgaacaatggtccattacttcctgaa
aaggttgaggcacctctagaccccacaaaggagctaggaaggttgatttctgaacggaaa
tttgaggaggcatttatcgcagcattgcatagaagtgatgtatctattgtatcttggtta
tgctctcaggttgatttacatagacttttgacaatggttcctcttcccttaagccaaggt
gtagtgctttctcttttgcagcagttggcgtgtgatattaacaacgacatgtcccgaaag
atcgcatggatgacagatgtggctactgccattaatccctcggatcccatgataacaatg
catgtccggcccatattcgaacaagtctatcaaatactgaatcatcaacgtagcttgcct
acaatctccggtgctgatctttcaagtacccgccttttattgcatgtcatcaactccatg
cttacgacatgtaaatga
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