Vicia villosa (hairy vetch): 131662354
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Entry
131662354 CDS
T09680
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131662354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131662354
03036 Chromosome and associated proteins [BR:
vvo03036
]
131662354
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131662354
Coactivators
SAGA/TFTC/STAGA complex
131662354
Chromosome and associated proteins [BR:
vvo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131662354
STAGA complex
131662354
TFTC complex
131662354
SAGA complex
131662354
SLIK complex
131662354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CCDC47
Motif
Other DBs
NCBI-GeneID:
131662354
NCBI-ProteinID:
XP_058788105
LinkDB
All DBs
Position
LG3:complement(113247409..113252370)
Genome browser
AA seq
500 aa
AA seq
DB search
MSVIPKESIEVISQTLGIPNLSPDVALAVAPDLEYRIREIMQESIKCMRHSMRTFLTAED
VDSALALRNLEPIYGFASKDNLRFKRAPGHNDLFYIDDRDVDIKDLVEEPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPTEATPEIRKTEYKEDGLPVDVKLPVKHIITTELQLYYEKII
ELILNKPGSIPFRRALVTLATDSGLHPLVPYFTRFVADEVARNLHNLNNLFASMRLVRSL
LQNPHIHIELYLHQLMPPIITCIVAKRLGNRLSDNHWELRDFSANLVALICKRFGHMYHN
LQPRVTRTFLHTFLDPTKALPQHYGAIKGIAALGSRMVRLLIIPNLEPYLHLLVPEMQLE
KQKNEIKRQEAWQVYGALLCAVGQNMHEKVKGISSLLSPPTRAASNGNGKAMIAMPGVTG
VVVPMNSMSVDNMQGSTSGFSPMMGAPSSVGRQLPKENSPILAQAWKDDIDAGQLLPPVF
ELFGESLLSFIPKPEASIFL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgattccaaaggaatccattgaagtaatttcacaaacacttggcatccccaat
ttatctcccgatgttgccctcgccgttgctcccgatcttgaatatcgcatccgcgaaatc
atgcaggagtctattaaatgtatgcgtcattccatgagaacttttctcactgctgaggat
gttgacagtgcactcgcattgcgaaatttagagccgatatatggtttcgcgtctaaagat
aatctgcggttcaaaagagctcctgggcataatgatttgttctacattgacgacagggat
gtggatattaaagatttggttgaagaacctttaccgaaagcccctcttgatacgtcgatt
accagtcattggttggctattgaaggtgtgcaacctgcaatacctgaaaatgctccgact
gaagctacccctgagataagaaaaactgaatataaagaagacgggcttcctgttgatgtt
aaattacctgttaaacatataataacgacagagcttcagctttactacgaaaaaataata
gagctgattttgaataagcctgggtccattcctttcagaagagcattggtcaccttggca
actgactcaggactccatcctttagttccttatttcacacgctttgttgctgatgaggtg
gctcgaaatctacataatttaaataatttatttgcttcgatgcgccttgtccggagcctt
ttgcaaaatcctcacatacacatagaactttatttgcaccaattgatgccgcctatcatt
acttgcattgttgcaaaaaggcttggaaacagactgtccgataatcactgggagcttagg
gatttcagtgctaatcttgttgctttgatatgcaaaagatttgggcatatgtatcacaat
cttcagccccgtgtaacgaggacatttcttcatactttcttggatcctacaaaagctctg
cctcaacactatggtgcaattaaaggaatagcagctcttggatcaagaatggttcgcttg
cttataattccaaatctcgagccatatttgcatcttcttgtgccagaaatgcaacttgag
aagcaaaagaatgaaataaaaaggcaagaagcatggcaagtttacggagccttgctgtgt
gcagtaggccaaaatatgcacgaaaaggtcaaaggaataagcagtttgctttcccctcca
actcgcgcagcgtcaaatggcaatggaaaagccatgattgcaatgccaggtgttactgga
gttgtggtaccaatgaattccatgtcagttgacaacatgcaggggtcaacaagtgggttt
tcccccatgatgggcgcgccatcatcagtgggtcgtcaattacccaaagaaaactctccc
attctagctcaggcttggaaagatgacatagatgcaggacaattgctgccaccagtgttt
gaattatttggcgaaagtttgttatcattcataccaaaacctgaagcatctatatttttg
tag
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integrated database retrieval system
