Vicia villosa (hairy vetch): 131662434
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Entry
131662434 CDS
T09680
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
vvo
Vicia villosa (hairy vetch)
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvo03041
]
131662434
03009 Ribosome biogenesis [BR:
vvo03009
]
131662434
Enzymes [BR:
vvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131662434
Spliceosome [BR:
vvo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131662434
Ribosome biogenesis [BR:
vvo03009
]
Eukaryotic type
Pre-60S particles
Helicases
131662434
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
131662434
NCBI-ProteinID:
XP_058788198
LinkDB
All DBs
Position
LG3:complement(134667640..134674836)
Genome browser
AA seq
762 aa
AA seq
DB search
MSPSFIFDPPSDEEIELSEHESDSESEQEQEQPESPSQSQSESESELESEEDEVIEPRVS
KKKTQSPWDFTKYSESVAEEHERRSTTSVNDKISAVRQRSAPVVALPDSDDESASDSEPD
KQEDYRPEEEDEEEGNAGDTKSFFAPSDGASFSADSFMQLNLSRPLLRACEALGYAKPTP
IQAACVPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVYAIRVLILTPTRELAA
QVHSMIEKLAQFTDIRSCLIVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSMSVNLD
DLAVLILDEADRLLELGFDAEVQELVRLCPRKRQTMLFSATMTDKVADLVKLSLSKPLRL
SADPSAKRPASLTEEVVRIRRMREVNQEAVLLAMCTKTFTSKVIIFSGTKQAAHRLRIIF
GLSGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRD
ITSYVHRVGRTARAGRAGSAVTFVTDNDRSLLKSIAKRAGSKLKSRIVAEQSILKWSQVI
EQMEDQISEVLQEEREEMILRKAEMEATKAENMIAHRDEIFSRPKRTWFVTGKEKKLSAK
AAKASMDKENGSSQKMVSAQEAEDLKLKEKRKREREKNMPRKKRRKLEAAREMLEDEEQD
DKPRGKGTDKNEKGGMTLADLAYRRAKAVKAVKRALDSGKIVRKPQKKSNKSTSRKTSSS
RTEEMRELFQTDMKDKKPKQRGSGLGKKPNKSFKSKSRYKRK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccagtttcatcttcgaccctcccagcgacgaagaaatcgaactctccgaacac
gaatctgattcggaatcagaacaagaacaagaacaaccagaatctccatcacaatcacaa
tcagaatcagaatcagagctagaatcagaagaagatgaagtcatagaaccgcgagtttcg
aaaaagaaaacacagtctccatgggatttcactaaatactctgaatcagtagctgaagaa
catgaacgtagaagcacaacgtcagtaaacgacaaaatctcagccgtcagacaacgttca
gcgcccgtcgttgctttgcctgattcagacgatgagagcgcctctgactccgagcctgat
aaacaagaagattatagaccagaagaagaagatgaggaagagggtaatgctggtgacact
aagtccttttttgctccttctgatggagcctctttcagtgctgattccttcatgcaactc
aatttgtctcgccctttgctcagggcttgtgaggccttggggtatgctaaaccaacacca
attcaggcggcttgtgtaccattagcattgactggtcgtgatatatgtggaagtgccatt
actggatcgggaaagacagctgcatttgcactacctactttagagaggttgctgtttcgt
ccaaaacgcgtgtatgcaataagggtccttattcttactccaaccagagagttggctgcc
caagttcacagtatgatagagaagcttgctcaatttactgacataaggagttgtctgatt
gtcggtggtctttcaacaaaggtgcaagaggctgccttgagatcaatgccagacattgtt
gtggctactccaggacgcatgatagaccatttacgcaattctatgtcggtgaatttggat
gatcttgctgttttgatccttgatgaagctgatcgtcttttggagcttggatttgatgct
gaagttcaagaacttgttcgcttgtgtcccagaaaaaggcagaccatgcttttttcggca
accatgaccgataaggttgctgatcttgttaaactttccctatcaaaaccactgcgtctt
tctgctgatccatctgctaaacggccagcatccttgactgaagaagtggttagaataaga
agaatgcgtgaagtcaatcaggaagcagttcttcttgcaatgtgcaccaaaacttttact
tctaaagtgatcattttcagtggaacaaagcaggcggcacacaggctcaggattatattt
ggattatctggattgaaagctgctgagcttcatggaaatcttactcaggcccaacgtctt
gaagctttggaacagttcaggaagcagcaagtggattttttggttgcaactgatgtggct
gctcgtggacttgacattatcggtgttcaaacggttatcaattttgcttgtccacgcgat
attaccagctatgttcatcgagttggtcgtactgcaagagccggaagagcgggatctgct
gtcacatttgttactgataatgatcggtcacttctaaagtctattgcaaaaagggctggt
tcaaagctgaaaagccgcattgtggcagagcaatctatactcaaatggtctcaagttatt
gagcaaatggaggatcaaatttctgaagtacttcaagaagagagggaagaaatgatccta
aggaaagctgaaatggaggccacaaaggccgaaaacatgattgcacacagggatgagatc
ttctcccgccccaaaagaacctggtttgttacagggaaggagaagaagctttctgctaaa
gcagcaaaggcatccatggataaggaaaatggttcttctcagaagatggttagtgcccag
gaagctgaagacctaaaattgaaggaaaagaggaaacgggagcgagagaaaaatatgcct
aggaagaaacgcagaaaattggaagcagctagagagatgttggaggatgaggagcaggat
gacaagccaagaggtaaggggacagataagaatgaaaagggtggaatgacacttgctgat
cttgcatacagacgtgcaaaagcagtaaaggctgtcaagagggcactagattctgggaag
attgtgaggaagcctcagaagaaatctaataaatccacttctcgtaagacttcctcttct
aggacggaagagatgcgggagctattccaaactgacatgaaggataaaaagccgaaacaa
agaggttctggacttggaaagaagcccaataaatcattcaaaagcaagtcaaggtacaag
cggaagtag
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