Vulpes vulpes (red fox): 112908516
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Entry
112908516 CDS
T05911
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112908516 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvp04121
]
112908516 (TRIM54)
Ubiquitin system [BR:
vvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112908516 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
DUF349
Sina_RING
UvrD_C
MIF4G_like_2
COG2_C
PHP
DUF1421
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
112908516
NCBI-ProteinID:
XP_025839750
UniProt:
A0A3Q7SDV8
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKAELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEERPDGP
EVRPPCRTSDLWWPPHPQREERPLARVQKYTLFPTSLSSGALGDQSRLPSDPITTLPFPG
SGPI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacatagcatggacaacctg
gagaagcagctcatttgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgaaagtgtgccaacgatgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccaccgtgtcttcaggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtgtatggcctgcagcgaaacctgcta
gtagagaacattatcgacatttacaagcaggagtcttcccggccactgcactccaaggcc
gagcagcacctcatgtgtgaggagcacgaagaggagaagatcaatatctactgcctgagc
tgcgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaagactgtgaggtg
gccccactgcccaccatttacaaacgtcagaagagcgagctcagtgatggcatcgcaatg
ctggtggcgggcaacgatcgtgtgcaagcagtgatcacacagatggaggaagtgtgccag
accatcgaggacaacagccggaggcagaagcagctgcttaaccagaggttcgaggccctg
tgctccgtgctggaggagcgcaaggccgagctgctgcaggcgctggcccgcgagcaggag
gagaagctgcagcgcgtccggggcctcatccgccagtatggagaccacctagaagcctcc
tctaagctcgtggagtccgccatccagtccatggaggagccacagatggcgctgtacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagaaccgggctatgaaagcatggagcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagcccggcgcttccggggaggaagaggatgaggag
gtggcattggacggggaagagggcagcgcagggccggaggaagagcggccggatgggccg
gaagtgaggcctccctgccgcaccagcgatctttggtggcctccccacccgcagcgggag
gagcgccccctagcgcgcgtgcagaagtacactctctttcccaccagcctttcctctggg
gctttgggagaccagtctcggcttccgagtgaccccatcaccaccctgcccttccccgga
tccgggcccatttga
DBGET
integrated database retrieval system
