KEGG   Vulpes vulpes (red fox): 112911054
Entry
112911054         CDS       T05911                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03420  Nucleotide excision repair
vvp04120  Ubiquitin mediated proteolysis
vvp05161  Hepatitis B
vvp05170  Human immunodeficiency virus 1 infection
vvp05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112911054 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112911054 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    112911054 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    112911054 (DDB1)
   05161 Hepatitis B
    112911054 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvp04121]
    112911054 (DDB1)
   03400 DNA repair and recombination proteins [BR:vvp03400]
    112911054 (DDB1)
Ubiquitin system [BR:vvp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     112911054 (DDB1)
DNA repair and recombination proteins [BR:vvp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112911054 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112911054 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 112911054
NCBI-ProteinID: XP_025843159
UniProt: A0A3Q7RB25
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNVETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcccagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagccgaagacttgaacctgttgattgccaaaaacacgaggttggag
atctatgtggtcactgctgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgcagtcatggagctcttcaggcccaagggggagagcaaggacctactgtttatcctg
acagctaaatacaatgcctgcatcctggaatataagcagagtggcgagagcattgatatc
ataacgcgagcccatggcaatgtccaggaccgtattggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactctatgatggccttttc
aaggttattccgctagaccgggacaataaagagctcaaggcctttaacatccgcctcgag
gagctgcatgtcatcgatgtcaagttcctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcatgtgaaaacttacgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagcccttcggaggggccatcatcattggacaggaatcaatcacctatcac
aatggtgacaaatacctggcaattgctcctcctatcatcaagcaaagcacaattgtgtgt
cacaatcgtgtggaccccaatggttcccgctatctgctgggagacatggagggaaggctc
ttcatgctgcttttggagaaggaggaacagatggatggcactgtcaccctcaaagatctc
cgtgtggagctcctcggagagacttctattgctgaatgcttgacataccttgataatggt
gttgtgtttgttgggtctcgccttggggactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gatatgtgtgtggtggacctggagaggcaggggcagggacagctggttacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaatcggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggtctgtggccactgcggtctgacccaaaccgggag
actgatgacactttggtgctctcttttgtgggccagacaagagtcctcatgttaaacgga
gaggaagtggaagaaaccgaactgatgggttttgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcaacaactcatccagatcacttcagcatctgtgagattggtctct
caggaacccaaagctctggtcagtgagtggaaggagcctcagggcaagaacatcagtgtg
gcctcctgcaacagcagccaggtggtagtagctgtgggaagggccctctactacttgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcctgc
ttggacatcacgccactgggagacagcaatgggctgtcccctctttgtgccattggcctg
tggacggacatctctgcacgtatcttgaagctgccgtcttttgagctgctgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacttttgagagtagccac
tatctcctttgtgccttgggagatggggcacttttctacttcgggctcaacgttgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacacagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaagttggtcttttccaatgtcaacctcaaggaggtcaactacatgtgt
cccctaaactctgatgggtatcctgacagcctggcactggccaacaacagcactctcacc
attggcaccatcgacgagatccagaaactgcacatccgcacagttcccctctatgagtct
cccaggaagatctgctatcaggaagtgtcccagtgctttggggtcctctccagccggatc
gaagtccaagacacaagtggcggcacaacggccctgaggcccagtgctagcacccaggcc
ctgtccagcagcgtcagctccagcaagctattctccagcagcacagcaccgcatgagacc
tcctttggagaagaggtggaggtgcacaatcttctcatcattgaccagcatacctttgaa
gtgcttcatgcccaccagtttctgcagaatgagtatgctctaagcctggtctcctgcaag
ctgggcaaagaccccaacacgtacttcattgtgggcacagccatggtgtatcccgaagag
gcagagcccaagcaaggtcgaattgtggtctttcagtattctgacggaaagctacagact
gtggccgagaaggaagtgaaaggagctgtgtactctatggtggaatttaatgggaagctc
ttagccagcatcaacagcacggttcggctttatgagtggacaacagaaaaggagcttcgc
actgagtgcaatcattacaacaatatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggtgacctgatgcgatcagtgctgctgcttgcctacaagcccatggagggg
aactttgaagagattgctcgagacttcaatcccaactggatgagtgctgttgaaatcttg
gatgatgacaatttcctgggagctgaaaatgcttttaacttgtttgtgtgtcagaaggat
agtgctgccaccactgatgaggagcggcaacacctccaggaggtcggtctcttccatctg
ggtgaatttgtcaacgtcttttgccatggctctctggtcatgcagaatctgggcgagact
tccactcctacacagggctcagtgctctttggcacagtcaatggcatgattgggctggtg
acctcgctgtcagagagctggtacaacctcctgttggatatgcagaatcgactcaataaa
gtcatcaagagtgtgggcaagattgagcactccttctggagatcctttcatactgagcga
aaaacagaaccagccacgggcttcattgatggagacttgattgagagtttcctggacatc
agccggcccaagatgcaggaggttgtggcaaacctgcagtatgatgatggcagcgggatg
aagcgagaggccactgcagatgacctgatcaaagttgtggaggagctgacacggatccat
tag

DBGET integrated database retrieval system