Vulpes vulpes (red fox): 112913312
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Entry
112913312 CDS
T05911
Symbol
PDZRN3
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
vvp
Vulpes vulpes (red fox)
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvp04121
]
112913312 (PDZRN3)
Enzymes [BR:
vvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112913312 (PDZRN3)
Ubiquitin system [BR:
vvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
112913312 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-TRAF
Sina_ZnF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
112913312
NCBI-ProteinID:
XP_025845668
UniProt:
A0A3Q7RKD7
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDGCDARPVGRXXXXXXXXXXXXXXXXXXXXXXXXXGHCCARALRAHNGA
LQARLGALHKALKKEALRAGKREKSLVAQLAAAQLELLTNSELVLKKNEFFCDPQVNKIV
PRFLGGFLFVLLDPPRSNCIKHQIPETILSISELLEGEETKSLTLVLHRDSGSLGFNIIG
GWPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQIHDRIIEVNGKDLSRATHDQAVEAFK
TAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQTDITFEHIMALTKMSSPTPPVLDPYL
LPEEHPSAHEYYDPNDYIGGIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDI
GIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPEL
QLDEGWMDEDRNDFLDHLHMDMLEEQHQQAMQFTASRLQQKKHEEDGGTTDTATILSNQH
EKDSGVGRTDESTRNDESSEQENNGDDATASSTPLAGQRKLTCSQDTLGSGDLPFSSESF
LSADCADADYLGIPVDECERFRELLEFKCQAKSSSSPYGLYLDASKSDPESVDKELELLN
EELRSIELECLSIVRAHKMQQLREQYRESWMLHHSGFRNYNTSVDVRRHELSDITELPEK
SDKDSSSAYNTGESCRSTPLTLELSPDNSLRRAAEGGAEAYGPAAPKSLLSITEDAEAGG
AGLGPAAPRELXXXXXDGGSPGSPGSPGPGGPSFPHSPYKHAHIPAHAQHYQSYMQLIQQ
KSAVEYAQSQMSLVSMCKDLAPAGAAGARLEWKVKVRSDGSRYITKRPVRDRLLRERALK
IREERSGMTTDDDAVSELKLGRYWSREERKQHVVKAKEQRRRREFMMQSRLECLREQQAA
DDRREVSILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgccccgcgcgctgccgcggccgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgcccgag
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgggtgcgacgcgcggcccgtgggc
cgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnggccactgctgcgcgcgggccctgcgggcgcacaacggcgcg
ctgcaggcccgcctgggcgcgctgcacaaggcgctcaagaaggaggcgctgcgcgcgggc
aagcgcgagaagtcgctggtggcgcagctggccgcggcgcagctggaattgctaaccaac
agtgagctggtactgaaaaagaatgagtttttctgtgacccccaagttaacaaaattgtt
cccaggtttttgggaggctttctttttgttctgctagatccacccagatcaaattgtatc
aagcaccaaatcccagaaacgattttgtccatttcagaactcctggagggtgaagaaacc
aaaagtctgactcttgtgctacatcgggactctggctccctgggattcaatattattggc
ggctggccttgtgtggacaaccaagatggatcgtccactgaaggaatctttgtatccaaa
atagttgacagtgggcccgcagccaaggacggaggcctgcaaattcatgacaggattatt
gaggtcaatggtaaagacttatccagagcgactcatgaccaggctgtggaagctttcaag
acagccaaagagcccattgtggtacaggtgctgaggagaacccctcggaccaaaatgttc
acgcctccgtcagagtcacagctggtggacacgggaacccagaccgacatcaccttcgag
cacatcatggcactcacgaagatgtcctccccaaccccgccagtgttggatccctatctc
ctgcccgaggagcacccctcagcccacgagtactatgaccccaatgactacattggaggc
atccatcaggagatggacagggaagagctggagttggaggaagtggatctctacagaatg
aacagccaggacaagctgggcctcactgtgtgctaccggaccgatgatgaagacgacatt
gggatttatataagtgagatcgaccctaacagcatcgcggccaaggatgggcgcattcga
gaaggagaccgcattatccagattaatggaatagaggtacagaaccgtgaggaggccgtg
gctcttctaaccagtgaagaaaacaagaacttttccttgctgattgcaaggcctgaactc
cagctggacgagggctggatggatgaggacagaaacgactttctggaccacctgcacatg
gacatgcttgaagagcagcaccagcaggccatgcagttcacggccagcaggctgcagcag
aagaagcatgaggaagacgggggcaccacggacacggccaccatcctgtccaaccagcac
gagaaggacagcggcgtgggacgcacggacgagagcacgcgcaacgacgagagctcggag
caagagaacaacggcgacgacgccacggcctcgtccaccccgctggccgggcagaggaag
ctcacgtgcagccaggacaccctgggcagcggcgacctgccgttcagcagcgagtccttc
ctgtcggccgactgcgcggacgccgactacctgggcatcccggtggacgagtgcgagcgc
ttccgggagctgctggagttcaagtgccaggccaagagcagcagcagcccgtacggcctg
tacctggacgccagcaagagcgaccccgagagcgtggacaaggagctggagctgctcaac
gaggagctgcgcagcatcgagctggagtgcctgagcatcgtgcgcgcgcacaagatgcag
cagctgcgggagcagtaccgcgagtcgtggatgctgcaccacagcggcttccgcaactac
aacaccagcgtggacgtccgcaggcacgagctgtcggacatcaccgagctccccgagaag
tcggacaaggacagctcgagcgcctacaacacgggggagagctgccggagcaccccgctc
accctggagctgtcgcccgacaactccctgcgcagggcggcggaggggggcgcggaagct
tacgggccggccgcccccaagagcctgctctccatcaccgaggatgccgaggcgggcggc
gccgggctcggccctgcggccccgcgggagctggannnnnnnnnnnacgacggcgggagc
cccgggagccccgggagccccgggccgggcggcccctccttcccgcactcgccctacaag
cacgcgcacatcccggcgcacgcgcagcactaccagagctacatgcagctcatccagcag
aagtcggccgtggagtacgcgcagagccagatgagcctggtgagcatgtgcaaggacctg
gcccccgccggcgcggccggggcccgcctggagtggaaggtcaaggtgcgcagcgacggc
tcgcgctacatcaccaagcggccggtgcgcgaccgcctgctgcgcgagcgcgcgctcaag
atccgcgaggagcgcagcggcatgaccacggacgacgacgcggtgagcgagctgaagctg
ggccgctactggagccgcgaggagcgcaagcagcacgtggtgaaggccaaggagcagcgg
cggcggcgcgagttcatgatgcagagccggctcgagtgcctgcgcgagcagcaggcggcc
gacgaccgcagggaggtgagcatcctggaactgagccacaagaagatgatgaagaagagg
aacaaaaagatatttgacaactggatgacgatccaagaactcctgacccacggcacgaaa
tccccggatggcacgagagtctacaattccttcttatccgtgactactgtataa
DBGET
integrated database retrieval system
