Vulpes vulpes (red fox): 112914390
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Entry
112914390 CDS
T05911
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112914390 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112914390 (EXOSC1)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112914390 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
112914390 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
112914390
NCBI-ProteinID:
XP_025847202
UniProt:
A0A3Q7RMZ9
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVISVMRETE
SQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatcccgggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggcacttacactcgccacggctacatcttttcgtcgcttgctgggtgc
ctgacgaagagcagcgagaatggcgcgcttcctgtgatttctgtgatgagagaaacagaa
tctcaattactaccagatgtggggactattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtgcacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagacaaggttgagatttataag
agtttccgccctggtgacattgtcttggccaaagtgatctctctgggtgatgcacaatcg
aactatctcctgaccactgctgagaatgaacttggggtggtggtggcccacagtgaatcg
ggtgtccagatggttcccattagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggccagagtacagcctgaattcttacagacctaa
DBGET
integrated database retrieval system
