Vulpes vulpes (red fox): 112914403
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Entry
112914403 CDS
T05911
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
vvp
Vulpes vulpes (red fox)
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvp03000
]
112914403 (SOX13)
Transcription factors [BR:
vvp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112914403 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112914403
NCBI-ProteinID:
XP_025847227
UniProt:
A0A3Q7RN26
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All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MEVCIVVRVEMLCPSLVSLYLSSSPRMSMRSPGSALLAPDGVGTMVNCTVKSEGKKEPCH
EALQGSAAGAEPQLGDPARAPQDGADPQAPAQDCSSPESNGSPEPKRPGGSEAASGSQEK
LDFNQNLKEVVPAIEKLLSSDWKERFLGRSSVEAKDVKGTQESLAEKELQLLVMIHQLST
LRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQ
VNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLPLLHSPPAPVVKRPGAMA
AHPPLQEPSQPLNLTAKPKAPELPNASSSPSLKMNNCGTRPPSHGAPTRDLQASPPSLPL
GFLGEGDAVTKAIQDARQLLHGHGGALESSPNAPFRKDLISLDTSPAKERLEEGCVHPLE
EAMLGCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSR
WKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRR
QDARQSYVTPPQAGQLQMSSSDVLYPRVAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLR
EEGEATEDRHSVAEGELYRYSEDEDSEGEEKSDGELVVLTD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttgcattgttgtgagggtggagatgctgtgtccgtcattggtttcactctac
ttgtcctcctcccctaggatgtccatgaggagccctggctctgccctgctggccccagat
ggcgttggcaccatggtgaactgtactgtcaagtcagaagggaagaaggagccctgccat
gaggccctccagggctcagccgctggagctgaaccccagctcggagacccagcccgggct
ccccaggatggcgctgacccccaagctccagcccaggactgcagctccccagagagcaat
gggtccccggaacccaagagaccgggaggttctgaggctgcttctggaagccaggagaag
ctagacttcaaccaaaatttaaaagaagttgtgcctgctatcgagaagctgctgtccagt
gactggaaggagaggtttctgggaaggagctctgtggaagccaaagatgtcaaagggacc
caggagagcctggcagagaaggagctccagctcctggtcatgatccaccaactgtccacg
ctgcgggatcagctcctgaccgcgcactcagagcagaagaacatggccgccatgctgttt
gagaagcagcaacagcagatggagctggcccgccagcagcaggagcagatcgccaaacag
caacagcagctgattcagcagcaacataagatcaacctcctccagcagcagatccagcag
gtcaacatgccttatgtcatgatcccagccttccctccgagccaccagcctctgcctgtc
acccctgattcccagctggccttgcctatccagcctatcccctgtaaaccagtggagtac
cccctgccgctgctgcacagcccccctgcccctgtggtgaagaggcccggggccatggct
gcacacccccctctgcaggagccctcccagcctctgaacctcacggccaagcccaaggcc
ccagagctgcccaatgcctccagctcccccagcctgaagatgaataactgtggaacccgc
ccccccagccacggggcccccacgcgggacctgcaggccagcccgcccagcctgccccta
ggcttccttggtgaaggggatgctgtcaccaaagcaattcaggatgctcggcagctgctg
catggccacggtggcgctttagagagctcccccaacgcccccttccgcaaggacctcatc
agcctggacacgtccccggccaaggagcggctggaggagggttgtgtgcatcccctcgaa
gaagccatgttgggctgcgacatggatggctcccgccactttcctgagtcccgcaacagc
agccacatcaagaggcccatgaatgccttcatggtgtgggccaaggacgagcgaaggaag
atcctccaggctttcccagacatgcacaactctagcatcagcaagatccttggctcccgc
tggaagtccatgaccaaccaggagaagcagccctactacgaggagcaggcaaggctgagc
cggcagcatctggaaaagtatcctgactataagtacaagccgaggcccaagcgcacctgc
attgtggaaggcaagcggctgcgggtgggcgagtacaaagccctgatgaggacccggcgc
caggatgcccgccagagctatgtgacccccccacaggctggccagctgcaaatgagctcc
tctgacgtcctgtaccctcgggtggcaggcatgcccctggctcagcccctggtggagcac
tacgtgccccggagcctggatcccaacatgcctgtcatcgtcaacacttgtagcctcagg
gaggagggggaggccacagaagataggcactcggtggcggagggcgagctgtaccgctac
agcgaggacgaggactcagagggcgaggagaagagcgacggggagctggtggtgctcaca
gactga
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integrated database retrieval system
