Vulpes vulpes (red fox): 112915230
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Entry
112915230 CDS
T05911
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp01524
Platinum drug resistance
vvp03430
Mismatch repair
vvp05200
Pathways in cancer
vvp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112915230 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112915230 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
112915230 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
112915230 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvp03400
]
112915230 (MSH6)
DNA repair and recombination proteins [BR:
vvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112915230 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
nSTAND_NTPase5
WPP
Motif
Other DBs
NCBI-GeneID:
112915230
NCBI-ProteinID:
XP_025848390
UniProt:
A0A3Q7T0I3
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MSRQSTLYSFFPKSPALSNANKASARASGEGGGAAAAGASPSPGGDAAWSEAEPGPGPLA
GRASPPEARNINGGLRRAAAPAAPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRIHVQFFDDSPTRGWVSRRLLKPYTGSKSKEVQKGGHFYSSKPEILRAMQRAD
EALNKDKIERLELAVCDEPSEPEEEEEMEVGATHSSEKSEEDHEIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKR
KKMVTGNGSLKRKSSRKEMPPATKRSTGISSETKSALNAYSAPQNSESQAHIGGGCDDSS
RPTIWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLIIFYKVGKFYELYHMDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEEYFKEKLNEDSGVMLPQVLK
GMTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVSAT
RPGAVFAKANQRMVLDAVTLSNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMVVPDKISDVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDNFKSKILRQVITLQTKNPEG
RFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGSDGPMCRPVIL
LPEEGTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASESSTVDAEAVPKLLTLCKEL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctctacagcttcttccccaagtctccagcgctgagtaatgcc
aacaaggcctcggccagggcctcaggtgaaggcggcggcgccgctgccgccggggcctcc
ccttctcccggcggggatgcggcctggagcgaggccgaacctgggcctgggccgctggct
ggccgcgcgtctccgccggaggcgaggaacatcaacggagggctgcggagggctgccgcg
cctgcggcccccgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttatccctggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaagggaagtctgtccgaattcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctattaaagccatacacagggtcaaaatcaaaggaagtacaa
aagggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattgagaggcttgaattggctgtgtgtgatgagccctca
gaaccagaggaagaagaagagatggaggtaggtgcaactcattcatcagaaaagagtgaa
gaagaccatgaaattgaaagtgaagaagaagtaaggcctaaggtccaaggatctaggcga
agtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagcagt
ggagtaggggatagtgacagtgaaggcctagacagcccggtcaaagttgcttcaaagcgg
aagaaaatggtgactggaaatggctctctcaaaaggaaaagttcaaggaaggaaatgccc
ccggccaccaaacgatcaactggcatttcatcggaaaccaagagtgctttgaatgcttac
tctgcccctcaaaattctgaatctcaagcccacattggtgggggatgtgatgatagtagt
cgccccactatctggtatcatgaaactttagaatggcttaaggaggaaaagagaagagat
ctgcataggaggcgacctgatcaccctgattttgatgcatccacactctatgtgcctgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcagatcaagtcccagaac
tttgatctgattatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttactggagtcaatgaactagggctggtattcatgaaaggcaactgggctcattctggt
ttccctgaaattgcatttggacgatactctgattctctggttcagaagggctataaagta
gcacgagtggaacagactgagaccccagaaatgatggaggcacgatgccggaagatggca
catatatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggt
acacagacctacagtgtattggaaggtgacccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaggattcttctggccacactcgggtgtatggagtatgtttt
gttgatacctcactgggaaagtttttcataggtcagttttcagacgatcgccattgttcc
aggtttaggactctagtggcacactatcctccagtacaagtcttgtttgagaaaggaaat
ctctcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggt
ctcataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
gaatattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaa
ggtatgacctcagagtctgattctcttgggctgacaccaggagagaagagtgaattggcc
ctttctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagctc
ttatcaatggctaattttgaagaatacgttcccttggattctgacatggtcagtgctaca
agacctggtgctgtttttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
agcaacttggagattttcatgaatggaacaaatggttctactgaagggaccctgctagag
aagattgatacttgccacactccctttggtaagcggcttctaaagcagtggctttgtgcc
ccactctgtagcccttatgctatcaacgatcgtctagatgctatagaagacctcatggtt
gtgcctgacaaaatctctgatgtggcggaccttttaaagaagcttccagacctcgagagg
ctgctgagtaaaattcataatgttgggtctcccttgaagagccagaaccacccagatagc
agagctataatgtatgaagagactacatacagcaaaaaaaagattattgattttctttct
gctctagaaggattcaaagtaatatgtaaaattatagagatcatggaagaagtcgtggac
aactttaagtctaaaatccttaggcaggttattactctgcagacaaaaaatcctgagggc
cgttttcctgatttgactgtagaattgaaccgatgggatacagcctttgatcatgaaaag
gctcgaaagactggactaattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagt
cgaattggctgcaggaccattgtctactgggggattggtaggaaccgttatcagttggaa
attccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatctaccaag
aagggctgtaaacgatactggaccaaaactattgaaaagaagttggctaatctgataaat
gctgaagaacggagagacgtatcattgaaggactgtatgaggcgactattttataacttt
gataaaaattacaaggactggcagtctgctgttgagtgcattgcagtattagatgtctta
ctgtgcctggctaactacagtcaagggagtgatggccctatgtgtcgtccagtaattttg
ttgccagaagaaggcactcctcccttcttagaccttagaggatcacgtcatccctgcatt
acgaagactttttttggagatgactttatacccaatgacattctaataggctgtgaggaa
gaggaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaacatggggggc
aagtctacactcatgagacaggctggcctattagctgtaatggcccagatgggttgttat
gtacctgctgaagtgtgtaggctcacaccaattgatagagtatttactagacttggtgcc
tcagacagaataatgtcaggcgaaagtacattttttgttgaattgagtgaaactgccagc
atacttacgcatgcaaccgcacattctctggtgcttgtggatgaattagggagaggtact
gcaacatttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacata
aagtgtcgtacattgttttctacccactaccattcgttagtagaagattattctcaaaat
gttgcagtgcgcctgggccacatggcatgcatggtagaaaatgaatgtgaggatcctagc
caggagactattaccttcctctataaattcattaagggagcttgtcctaaaagctatggc
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgactcaatcactacgattatttcgggaagtttgcctggct
agtgaaagctcgactgtagatgctgaagctgtccctaagttgctgactttgtgtaaggaa
ttatag
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integrated database retrieval system