Vulpes vulpes (red fox): 112916387
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Entry
112916387 CDS
T05911
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vvp
Vulpes vulpes (red fox)
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvp03016
]
112916387 (TRUB1)
Enzymes [BR:
vvp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112916387 (TRUB1)
Transfer RNA biogenesis [BR:
vvp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112916387 (TRUB1)
Prokaryotic type
112916387 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
112916387
NCBI-ProteinID:
XP_025849790
UniProt:
A0A3Q7T4N1
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAATEAAVVSSSSLETDTALVPETAGTPAATAATSPATAAAAAAARTGPDARVSKAALAT
KLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDSA
ARGVLVVGIGRGTKMLTGMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQEDIE
GILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPFF
TLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQS
LEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIKTY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccgaggcggcggtggtatcgtcgtcatctttggaaacagacacagccctg
gtccctgaaactgcaggaacacccgccgcaacggccgccacctccccagcgacggctgca
gccgcggccgctgccaggaccggacccgacgccagggtctccaaggccgctctggctact
aagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggcccacttcagcc
gagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttctccagaa
tggaccaaaaggaaaaagcagactttgaaaattggacatggagggacactagacagtgca
gcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgaccggtatgttg
tcagggtccaagaggtatattgccattggagaactggggaaagctactgacacactagac
tctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaagatattgaa
ggcattctacagaaatttactgggaatataatgcaggtacctcccctctattctgcatta
aagaaagatggacagagactttcaaccttgatgaagagaggtgaagtagtagaagcaaaa
cctgccaggcctgttaccgtatacagtctctcccttcaaaaattccagccaccatttttc
acattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacattggc
aaagaactctcttcctgtgccaatgtcctagagctgacccgaaccaaacagggaccattt
acactagaagagcacgctctgcctgaagacaaatggacgattgatgacattgcacagtct
ctggaacattgctcatctcttcttccagcagaattggcacttaaaaaatcaaaacctgag
gaatctaatgaacaagttttgagctgtgaatatataactctcagtgagacaaagggagaa
gatgatgtcattaagacatattaa
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integrated database retrieval system
