Vulpes vulpes (red fox): 112917079
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Entry
112917079 CDS
T05911
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03440
Homologous recombination
vvp03450
Non-homologous end-joining
vvp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112917079 (RAD50)
03450 Non-homologous end-joining
112917079 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112917079 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvp03032
]
112917079 (RAD50)
03400 DNA repair and recombination proteins [BR:
vvp03400
]
112917079 (RAD50)
DNA replication proteins [BR:
vvp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
112917079 (RAD50)
DNA repair and recombination proteins [BR:
vvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
112917079 (RAD50)
BRCA1-C complex
112917079 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
112917079 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
112917079
NCBI-ProteinID:
XP_025850723
UniProt:
A0A3Q7S4F9
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYVCTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLRFRDVNGELIAVQRAMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEREAEIASQLMNDFAE
KETLKQEQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEVLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDITIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQYLKSTTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQS
LSREIKDAKEQLSPLETILEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNQVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVTCNVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaacggggcg
gggaagacgaccatcattgaatgtctaaaatatgtttgtactggcgattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcggtttcgtgatgtcaatggagaacttatagctgtgcagagagctatg
gtgtgtactcagaaaagcaaaaagacggaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggtgtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgagggaaaggccctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaattaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgatcagattactagtaaggaagcccagttaacatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgacttatatcacaatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaactggaaaagttaaataaagaatcaaggcttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtctacagctacaagcagatcggcat
caagaacatatccgagctagagattcattaattcaatctttggcaacacagctagaattg
gacggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccaactgatgaatgactttgcagaa
aaagagactctgaaacaagaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagttcta
aaaacagaagtaataagccttcaaaacgagaaagcagacctagataggaccctgcgtaaa
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggaaatg
ctgaccaaagacaaagctgacaaagatgaacaaattagaaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagactggccaaattgaacaaagaa
ctagcttcggctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggactttgaaagt
gatttagataggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagctacagcagtttactctcaattcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcaaacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgatgaaatgctgggacttgtccctatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggaaacgctcttaggcacaataatgcct
gaagaagaaagtgctaaagtttgtctgacagatattacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggactagac
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacagatt
caatacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaaatggaggaacagactgtggaattatccactgaagttcagtcc
ttatccagagagataaaggatgctaaagagcagttaagccctttggaaacaatattggag
aagttccaacaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaatagca
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aatcaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagaa
atgggaatcatgagacaagatattgatacacagaagatccaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tacgaggaagaaattattcattttaaaagagaacttcgagaacctcaatttcgggatgca
gaggaaaagtacagggaaatgatgattgttatgagaacaacagagcttgtgaacaaagat
ctcgacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaggaaatcaacaaaattatacgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatccgcttctgataaaaggcgg
aattataactaccgcgtggtgatgctaaaaggagacacagctttggatatgagaggacga
tgcagtgctggacaaaaggtactggcctcactcatcattcgtctggcgttggctgaaaca
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataattaagagtcgctcacagcagcgt
aacttccagcttctggtcatcactcacgatgaagattttgtagagctcttaggccgctct
gaatatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagattgtg
acatgtaatgttagctccctgggttcttacgttcattaa
DBGET
integrated database retrieval system
