Vulpes vulpes (red fox): 112917995
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Entry
112917995 CDS
T05911
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112917995 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvp03400
]
112917995 (LIG3)
Enzymes [BR:
vvp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112917995 (LIG3)
DNA repair and recombination proteins [BR:
vvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
112917995 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
FMP23
FAD_binding_1
Motif
Other DBs
NCBI-GeneID:
112917995
NCBI-ProteinID:
XP_025851925
UniProt:
A0A3Q7TA43
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MTLAFKILFPPTFRALRRKELCLFREPHHWPDIRQFSHWSERDLLHGSCLLQRRKPVLSF
QEGSLRPRATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKATGTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEA
RSSPTPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSRSFPPAAKSLLTIQEVDKFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMT
PVQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLSERRKFLHDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADMADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFT
VAAGEEGSSTTGGSSSGENGGVSGPAGARKAKKVGGRPSSPSDRGGHKLIAKPSPVKVGQ
KRKAPDEASCPAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMASATHVL
GSGDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccaccaaccttccgcgcactcaggcgaaaagaa
ttgtgcctgttccgagagccacatcactggcctgacataagacagttcagccattggtca
gaaagagatctgcttcatgggtcctgcctcctccagagaagaaagcctgttctgtcattc
caggaaggcagtctaagaccacgtgccacctgccttgtttttttgccagggtcgcatgtg
ggactctgcagtgggccctgtgagatggctgagcaacggttctgtgtggactatgccaag
cgtggcacggctggctgcaaaaaatgcaaagaaaagattgtgaaaggtgtatgccggatt
ggcaaagtggtgcccaatcccttctcagagtccgggggtgatatgaaagagtggtatcac
attaaatgcatgtttgagaaattggagcgggcccgggccaccacaaaaaaaattgaggac
ctcacagagctggaaggctgggaagaactggaagataatgagaaggaacagataagccag
cacattgcagatctgtcttctaaggcaacaggaacaccaaagaagaaagctgtcgtccag
gctaagctgacagccactggccaggtgacctctccagtgaaaggtgcctcatttgtcacc
aataccaatccccggaaattttctggtttttcagccaagcccaacaactctggggaagcc
cgctcaagccctacccctaaggcaagtttgtcctcaagcagatgtgatcccaagcacaag
gattgtctgctacgtgagtttcggaagctgtgtgccatggtggctgagaatcctagctac
aacacgaagacccagatcatccaggactttcttcggaaaggttcagcaggagatggtttc
cacggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaagagtgtttac
aacttgaatgataagcagattgtgaagcttttcagccgcatttttaattgcaacccagat
gatatggcacgggacctagagcagggcgacgtgtcagagacaatcagagtcttctttgag
cagagcagatctttccccccagctgccaagagccttcttaccatccaggaggtggacaaa
ttcctccttcagctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggac
atcgcctccaggtgtacagccaatgaccttaagtgcatcatcagattgatcaaacacgat
ctgaagatgaactcgggtgcaaaacacgtgttagatgcccttgaccccaatgcctatgaa
gccttcaaagcctcacgcaacctgcaggatgtggtcgagcgggtcctccgcaacgagcag
gaggtggagaaggagccaggccagagacgagctctgagtgtccaggcttccttgatgacg
ccagtgcagcccatgctggccgaggcctgcaagtccatcgagcatgcgatgaagaagtgt
cctaacggcatgttttccgagatcaagtacgatggggaacgagtccaggtgcataagaac
ggagatcacttcagctacttcagccgcagccttaagcctgtgctgcctcacaaggtggcc
cactttaaggactacatcccccaggctttccctgggggccacagcatgatcttggactcc
gaggtgctcctgatcgacacgaagacaggcaaaccgctgccctttgggactcttggagtg
cacaagaaagctgccttccaggatgctaatgtctgcctttttgtttttgattgtatctac
ttcaatgatgtcagtttgatggataggcctctctctgagcgccggaagtttcttcacgac
aacatggtggaaattcccaaccggatcatgttctcagaaatgaagcaagtcactaaagct
tcagacttggtcgacatgataaaccgggtcatccgagaggggctggaagggctggtgctg
aaggacgtgaagggtacctatgagcctggaaagcggcactggctgaaagtgaagaaagac
tatttgaatgagggggccatggctgatatggcagacctggtggtccttggggccttctat
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccaagt
agccagaagtggtgcacggtcaccaagtgttcaggaggccatgatgatgcgacccttgcc
cgcctgcagaaggaactggacatggtaaagatcagtaaggatcccagcaaaatacccaac
tggctgaaaatcaacaagatctactatcctgacttcatagtcccagacccaaagaaagct
gctgtgtgggaaatcacgggggctgagttctccaggtctgaggctcacacagccgatggg
atctccatccgattccctcgttgtacccggatccgtgacgataaggactggaaatctgcc
actaaccttccccagctcaaggaactgtaccagctgtccaaggagaaggcggacttcact
gtggcggctggagaggagggaagctccacaacagggggcagcagcagcggagagaacggg
ggtgtctcagggcctgctggggctcgcaaggccaagaaggtgggagggaggccgagtagc
cccagtgacagaggcggccacaagttgatagccaaaccttcccctgtgaaagtggggcag
aagcggaaggctcccgatgaggcttcatgcccagcaaaggtgctgctggacatcttcact
ggtgtgcggctctacctgccaccctccacgccagacttcagccgtctcagacgctacttt
gtggcattcgatggggacctggtgcaggaatttgacatggcatcagccacacatgtgctg
ggtagcggggacaagaaccctgaggctcagcaggtctccccggagtggatttgggcatgt
atccggaaacgaaggctggtagctccctgctag
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