Vulpes vulpes (red fox): 112918240
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Entry
112918240 CDS
T05911
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112918240 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvp03041
]
112918240 (PRPF38B)
Spliceosome [BR:
vvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112918240 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
112918240 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
112918240
NCBI-ProteinID:
XP_025852113
UniProt:
A0A3Q7S857
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All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQQCGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGPEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKK
DSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQG
RTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQER
QHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggcggcg
gccgcggcccagcagcagcagcagcagtgcggcggcggcggcggcgccaccaagccggcg
gtctcgggcaagcaggggaatgtgctgccgctgtggggcaacgagaagacgatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgagccg
tgggagaaaggaagcaggaaaacagcaggccaaacggggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttctgcctgttatacaaattatttactctg
aagctaactcgtaagcaagtaatgggtctcataacgcacacagactctccatatattaga
gcccttggatttatgtatataaggtacacacagccccctacagatttatgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatg
accattggagaaatgctgcggtcttttctcacaaaattggagtggttttctaccctgttt
ccaagaattccagttccagttcagaagaatattgatcaacagattaaaacccgccccaga
aaaatcaagaaggatgggaaggaaggtcctgaggaaatagacagacatgttgaacgcagg
cgttccaggtctccgaggagatcactgagtccacggaggtccccaagaagatcaagaagt
agaagccatcatcgggagggccatgggtcttctagttttgatcgagaattagaaagagag
aaagaacgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcc
cgaagtattgatcgggggttggaacgcaggcggagtagcaggagtagggaaaggcataga
agtcgtagtcgaagtcgggataggaaaggggaccgaagagacagggatcgggaaagagaa
aaagaaaatgagagaggtagaagacgagatcgtgactatgataaggaaagaggtaatgac
cgagaaaaggagcgagagcgatcaagagaacggtccaaggaacggagaagtaggggtgag
gtagaagagaagaaacacaaagaagataaagatgataggcggcatagagatgacaaaaaa
gattccaagaaggagaaaaaacacagtaggagtagaagcagagaaaggaaacacagaagt
aggagtagaagtagaaatgcggggaaacgaagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaagga
agaactgacagtgttgaaaaatcaagaaaacgggagcatagccccagcaaagaaaaatct
agaaagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggac
cagtctgacaaacacgatcgtcgaaggagccaaagtatagaaccagagagccaagaaagg
caacataaaaacaaagatgagactgtgtga
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