KEGG   Vulpes vulpes (red fox): 112918240
Entry
112918240         CDS       T05911                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112918240 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvp03041]
    112918240 (PRPF38B)
Spliceosome [BR:vvp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    112918240 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    112918240 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 112918240
NCBI-ProteinID: XP_025852113
UniProt: A0A3Q7S857
LinkDB
Position
Unknown
AA seq 549 aa
MANNSPALTGNSQPQHQAAAAAAQQQQQQCGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGPEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKK
DSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQG
RTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQER
QHKNKDETV
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggcggcg
gccgcggcccagcagcagcagcagcagtgcggcggcggcggcggcgccaccaagccggcg
gtctcgggcaagcaggggaatgtgctgccgctgtggggcaacgagaagacgatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgagccg
tgggagaaaggaagcaggaaaacagcaggccaaacggggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttctgcctgttatacaaattatttactctg
aagctaactcgtaagcaagtaatgggtctcataacgcacacagactctccatatattaga
gcccttggatttatgtatataaggtacacacagccccctacagatttatgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatg
accattggagaaatgctgcggtcttttctcacaaaattggagtggttttctaccctgttt
ccaagaattccagttccagttcagaagaatattgatcaacagattaaaacccgccccaga
aaaatcaagaaggatgggaaggaaggtcctgaggaaatagacagacatgttgaacgcagg
cgttccaggtctccgaggagatcactgagtccacggaggtccccaagaagatcaagaagt
agaagccatcatcgggagggccatgggtcttctagttttgatcgagaattagaaagagag
aaagaacgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcc
cgaagtattgatcgggggttggaacgcaggcggagtagcaggagtagggaaaggcataga
agtcgtagtcgaagtcgggataggaaaggggaccgaagagacagggatcgggaaagagaa
aaagaaaatgagagaggtagaagacgagatcgtgactatgataaggaaagaggtaatgac
cgagaaaaggagcgagagcgatcaagagaacggtccaaggaacggagaagtaggggtgag
gtagaagagaagaaacacaaagaagataaagatgataggcggcatagagatgacaaaaaa
gattccaagaaggagaaaaaacacagtaggagtagaagcagagaaaggaaacacagaagt
aggagtagaagtagaaatgcggggaaacgaagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaagga
agaactgacagtgttgaaaaatcaagaaaacgggagcatagccccagcaaagaaaaatct
agaaagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggac
cagtctgacaaacacgatcgtcgaaggagccaaagtatagaaccagagagccaagaaagg
caacataaaaacaaagatgagactgtgtga

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