Vulpes vulpes (red fox): 112918944
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Entry
112918944 CDS
T05911
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112918944 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112918944 (SMG5)
03032 DNA replication proteins [BR:
vvp03032
]
112918944 (SMG5)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112918944 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
112918944 (SMG5)
DNA replication proteins [BR:
vvp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
112918944 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
112918944
NCBI-ProteinID:
XP_025853086
UniProt:
A0A3Q7SD84
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MTTAFPGQAASIPGFWFPQHHSLSCRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLMYLG
DLSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQ
PRSSPVDSELTSLCQSVLEDFNLCLFYLPSSPSLSLASEGEEDYESGYAFLPDLLIFQMI
IICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTD
EPLEKEEAPGPEPPSAATQATEVRKSRKFSRLSCLRRRRHPPKAGDDSDLSEGFESDSSH
DSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDIEDEEGTRSPALEPPRP
RSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPSTEPHTVANR
RSCVNGDADKPSEPASEEGSESEGSESSGHSCRNERSVQEKLQVLAAEGLLPAVKVFLDW
LRANPDLIVVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCPEVQDLLEGCELPDLPS
SLLLPEDTALRNLPPLRAAHRRFNFDTDRPLLNALEESVVRICCIRSFGHFIAHLQGSIL
QFSAEAGIFVSIAQSEQEGVLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSL
QQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARD
GIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEE
DPSGMVTIVTGFPLDNPSALSGPMQAALQAATHASVDIKNVLDFYKQWKEIG
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcattccctggccaggcagcttccattcctggtttctggtttccgcagcac
cactcactgtcctgcagggctgtggtggaggctgtgcatcgactcgacctcatcctttgc
aacaaaaccgcttatcaagaagtgtttaaaccagagaacattagcctgaggaacaagctg
cgtgagctctgcgtcaagcttatgttcctgcacccagtagactatgggagaaaggctgag
gagctgctgtggagaaaggtgtactacgaagttattcagcttatcaagacgaataagaag
cacatccacagccggagcaccttggaatgtgcctacaggacgcacctggttgctgggatt
ggcttctaccagcatctgctgctctacatccagtcccactaccagctggagcttcagtgc
tgcatcgactggacccatgttactgatcccctcataggatgcaagaagccagtgtctgcg
tcagggaaggagatggactgggcacagatggcctgccaccgatgtctcatgtacctgggg
gatttgtcacgatatcagaatgaattagctggcgtagacactgagctgctagctgagaga
ttttactaccaagccctgtctgtagctccccagatcggaatgccctttaaccagctgggc
acccttgcaggcagcaagtactacaacgtggaagccatgtactgttacctgcgctgcatc
cagtcggaagtgtccttcgagggggcctatgggaatctcaagcggctgtatgacaaggca
gccaaaatgtaccaccagctgaagaagtgtgagactcggaaactttctcccagcaagaag
cgctgtaaagacatcaagaggttgctggtaaacttcatgtaccttcaaagcctcctgcag
cccaggagcagcccggtggactcagagctgacctcactctgccagtcagtcctggaggac
ttcaatctctgcctcttctacctgccatcctcacccagcctcagcctggccagtgagggt
gaagaggactatgaaagtggctatgccttccttccagacctcctcatctttcagatgatc
atcatttgtctcatgggtgtgcatagcttgaagagagcagggtccaaacagtacagtgca
gccattgcatttaccctggccctcttctcccacctcgtcaaccatgtcaatatacggctg
caggctgagctggaggagggtgagaatcccgtgccggcgttccagagcgatggcacagat
gagcccttggagaaggaggaggcaccaggccctgagcccccttctgcagcaactcaagcg
actgaggtcagaaagagccggaagttctctcgcctctcctgcctccgccgccgccgccac
ccacccaaagctggagatgacagtgacctgagtgaaggctttgaatcagactcgagccat
gattcagccagggctagtgagggctcagacagtggctccgacaagagtctcgaaggtggg
ggaacagcctttgatgctgagacagactcagaaatgaacagccaagagtcccggtcagac
ctggaagacattgaggatgaggagggtactcggtccccggccctggagccccctcggccc
aggtcagaggctcccgagtctctcaatggcccactgggccccagtgaggcgagcattgcc
agcaatctccaggccatgtccacgcagatgttccagaccaagcgctgcttccgactggcg
cccaccttcagcaatctgctcctccagccttccactgagccccacactgtagccaaccgc
aggtcatgtgtcaatggagatgcagacaagccttcggaaccagcctccgaggagggctcc
gagtcggagggcagtgaatctagtgggcactcctgtcggaatgagcgcagtgtccaggag
aagctgcaagtcctggcagccgaaggcctgcttcctgccgtgaaggtcttcctggactgg
ctgcgggccaaccctgacctcatcgttgtgtgtgcacagagctctcaaagtctgtggaat
cgcctgtctgtgttgctgaacctgttgccagctgctggtgagctccaagagtctggcctg
gccctgtgtcccgaggtccaggacctacttgaaggttgtgaactgcctgacctgccctcc
agtctgctgctcccagaggacacggcccttcgtaacctgcctcccctccgggctgcccat
agacgcttcaactttgacacagaccggcccctgcttaacgctttagaggagtcagtcgtg
cgcatctgctgcatccgcagctttggccacttcatcgcccacctgcagggcagcatcctg
cagttcagcgcagaggctggcatctttgtcagcatcgcccagtctgagcaggagggtgtg
ctgcagcaggcccaggcgcagttccgtatggctcaggaagaggcccgtcggaacaggctg
atgagagacatggcccagctgcgacttcagctcgaggtctctcagctggaagggagcttg
cagcagcccaaggcccagtcagcaatgtctccctacctcgtcccggacacccaggccctc
tgccaccacctcccggtcatccgccagctggccaccagcggccgcttcattgtcatcatc
ccaaggacagtgattgatggcctggatttgctgaagaaggaacacccaggggcccgggat
gggatccgatacctggaggcagagtttaagaaaggaaacaggtacattcgctgccagaaa
gaagtaggaaagagctttgagcggcataagctgaagaggcaggatgcagatgcctggacg
ctctataagatcctggacagctgcaaacagttgactttggcccagggggcaggcgaggag
gacccaagcggcatggtgaccatcgtcacaggctttccactggacaaccccagtgcgctc
tcaggccccatgcaggcagccctgcaggccgctacgcatgccagtgtggacatcaagaat
gttctggacttctacaagcagtggaaggagattggttga
DBGET
integrated database retrieval system
